I wrote yes to generate velocity. Can that be a reason for the problem? Since I am doing membrane simulation it is advised to do production runs in npt thats the only other difference. ---------------------------------------- > Date: Sat, 15 Dec 2007 06:03:27 +1100 > From: [EMAIL PROTECTED] > To: gmx-users@gromacs.org > Subject: Re: [gmx-users] problem with npt > > pragya chohan wrote: > > > > thanks for your help. > > My system ran fine for 250 ps but later the bilayer deformed very much. > > What was your system preparation protocol - i.e. minimization and > equilibration? See > http://wiki.gromacs.org/index.php/Steps_to_Perform_a_Simulation > > Mark > _______________________________________________ > gmx-users mailing list gmx-users@gromacs.org > http://www.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [EMAIL PROTECTED] > Can't post? Read http://www.gromacs.org/mailing_lists/users.php
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