Dear gromacs users, I'm a beginner. I'm trying to compile gromacs 3.3.1 or 3.3.2 on the following linux cluster (centOS). Dual, Dual-Core 2220 2.8 GHz Opterons, 2 GB RAM per core, 64-bit. I will use 16 to 32 (64) cpus for the parallel simulations.
I tested mpich2, but there is a problem with infiniband communications. I have intel and GNU compilers and openMPI. Which option will give me the best performance? Have a nice weekend. -- Best wishes, MYUNGGI YI ================================== KLB 419 Institute of Molecular Biophysics Florida State University Tallahassee, FL 32306 Office: (850) 645-1334 http://www.scs.fsu.edu/~myunggi _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
