Regarding the failed test for simple/rb1, I used dmalloc and the message is

realloc for g->edge[0] (24 bytes, file mshift.c, line 251, g->edge[0]=0x0x 1)

the line in mshift.c is
srenew(g->edge[0],n);

Regards,.
Yang Ye

On 11/9/2007 1:35 AM, David van der Spoel wrote:
Yang Ye wrote:
got solved?

I am using Ubuntu 6.10 after updating its packages, gromacs still fail on the simple/rb1 test, in a symptom similar to Li Qiang's.
3.3.1 is able to pass all the tests.

Another thing is that acetonitrilRF also failed in 3.3.2 (both on Opteron and P4) but not with 3.3.1
-------------------------------------------------------
Program mdrun, VERSION 3.3.2
Source code file: network.c, line: 437

Routine should not have been called:
gmx_sumi
-------------------------------------------------------

Perhaps gmx-developer is a better place for this thread.

i've fixed this in CVS and posted a fix on the mailing lisst as well.


Regards,
Yang Ye

On 11/8/2007 5:03 AM, Dmytro Kovalskyy wrote:
The problem was solved by updating system libraries.

[EMAIL PROTECTED] exchange]# rpm -qf /lib/libc.so.6
glibc-core-2.5-alt5

Sorry, for wrong hypothesis.

Dima

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