Hi, I am using Gromacs 3.3.1. The .xtc file is obtained from mdrun, as shown in the following
; OUTPUT CONTROL OPTIONS ; Output frequency for coords (x), velocities (v) and forces (f) nstxout = 0 nstvout = 0 nstfout = 0 ; Checkpointing helps you continue after crashes nstcheckpoint = 0 ; Output frequency for energies to log file and energy file nstlog = 1000 nstenergy = 100 ; Output frequency and precision for xtc file nstxtcout = 10 xtc-precision = 1000 2007/11/1, David van der Spoel <[EMAIL PROTECTED]>: > > Qiao Baofu wrote: > > Hi, all > > > > When I using the .xtc file to analyse, I always meet the following error > > information > > Specified frame doesn't exist or file not seekable > > While it works when using the .trr file. In analyzing, only the > > coordinate is used. Therefore, I want to use .xtc file. In this way, it > > runs a little faster. However, the above proble exits. What's wrong > > with the .xtc file? and how to solve it? > > > gmx version please. > > Thanks! > > > > -- > > Sincerely yours, > > Dr. Baofu Qiao > > > > > > ------------------------------------------------------------------------ > > > > _______________________________________________ > > gmx-users mailing list gmx-users@gromacs.org > > http://www.gromacs.org/mailman/listinfo/gmx-users > > Please search the archive at http://www.gromacs.org/search before > posting! > > Please don't post (un)subscribe requests to the list. Use the > > www interface or send it to [EMAIL PROTECTED] > > Can't post? Read http://www.gromacs.org/mailing_lists/users.php > > > -- > David van der Spoel, Ph.D. > Molec. Biophys. group, Dept. of Cell & Molec. Biol., Uppsala University. > Box 596, 75124 Uppsala, Sweden. Phone: +46184714205. Fax: +4618511755. > [EMAIL PROTECTED] [EMAIL PROTECTED] http://folding.bmc.uu.se > _______________________________________________ > gmx-users mailing list gmx-users@gromacs.org > http://www.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [EMAIL PROTECTED] > Can't post? Read http://www.gromacs.org/mailing_lists/users.php > -- Sincerely yours, ********************************************** Dr. Baofu Qiao Frankfurt Institute for Advanced Studies Johann Wolfgang Goethe University Ruth-Moufang Str. 1 60438 Frankfurt am Main, Germany TEL:+49-69-79847522 **********************************************
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