I want to perform simulation of transmembrane
peptide. I have a perseuillibrated POPO (hydrated)
bilayer (using CHARMM),containing more than 32,000
atom. But when I try to convert ".pdb" to ".gro" using
"pdb2gmx", it shows the following error
Fatal error:
Residue "popc" not found in residue topology detabase
Please suggest how I can overcome this problem .
Moutusi
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