4. How to run ED with position restrain along first principle
component (Anirban Ghosh)
You can either keep it fixed with the -linfix option of mk_edi. The
other option is to use the flooding code, with a harmonic restraint on
the eigenvector. Check the paper
Flooding in gromacs by Lange, Schaefer and Grubmueller JCC (2006).
Gerrit
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