uki zhu wrote:
Dear all gmx-users,
Sorry to bother you.
I am trying to make a molecule with a unit charge well-distributed. But I do not know how to write such *.top file. Does every atom get the same charge at the beginning? And can we use Gromacs to simulate the changes of the charge distribution?

I don't understand what you're trying to do, or why you think GROMACS is suited for doing it.

Mark
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