On 8/16/2007 9:53 AM, Mark Abraham wrote:
huifang liu wrote:
I typed this command: grompp -f em.mdp -c speptide.pdb -p
\#spetide.top.1#\ -o speptide_em.tpr
It responded to me like this:Invalid command line argument:
speptide_empdb.tpr
I am a new -learner.Can you tell me where the problem is.
Backslashes are used to "escape" characters to which your shell would
otherwise assign a special meaning. Depending on your shell "#" might
start a comment, so to prevent that, you use a backslash before it, in
order to let the shell know you really want that character. Putting a
backslash before a space doesn't do you any good...
Mark
On top of Mark's point, many programs in GROMACS uses suffix to
determine the file type. To use those files with name beginning #, you
shall remove the leading and trailing # in the filename by renaming.
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