> Hello, > > I'm having problems with pdb2gmx not recognizing disulfides in my > protein. I've tried chaning the residue name and -ss flag but neither > works. > I read that this was a known bug on the website. Does anyone have a fix > for > this?
Did you use specbond.dat correctly? http://wiki.gromacs.org/index.php/specbond.dat Mark _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php