ASHWINI JAYAPRAKASH wrote:
Hi Mark,
I have changed the atom name in the co-ordinate file. Now I get an error
saying :
Residue "pop" not found in residue database
My co-ordinate file consists of protein, popc and sol. Do I have to add
the itp files of popc and sol to the rtp file.
Only if you want pdb2gmx to recognise these types of residues. See
http://wiki.gromacs.org/index.php/topology_file or chapter 5.
Mark
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