You can script pymol. Something like pymol -c -q mutation_script.pml.
/Erik
1 jun 2007 kl. 13.53 skrev Martin Höfling:
Hi all,
this is slightly OT but maybe someone has already written a quick
hack or so:
I wanna mutate a residue in a pdb/gro file with an other one
(matching to
backbone). There are several programs like pymol, swisspdb viewer
etc...
... but is there sth. like a script to do this automatically without
interactive input?
like:
mutate --input myprotein.pdb --output mymutated.pdb --resid 12 --
tores K
Cheers
Martin
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Erik Marklund, PhD student
Laboratory of Molecular Biophysics,
Dept. of Cell and Molecular Biology, Uppsala University.
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