Dear gmx users, I have one doubt regarding conversion of C6/C12 parameters to sigma /epsilon. I added atomtypes, pairtypes and dihedraltypes from lipid.itp to ffoplsaanb.itp---after changing C6/C12 paramters to sigma/epsilon as given in mailing list (http://www.gromacs.org/pipermail/gmx-users/2006-May/021416.html ). My questions are (1) Is it also required to do conversion of C6/C12 parameters of nonbond_paramsto sigma/epsilon and adding these parameters from lipid.itp to ffoplsaanb.itp. (2) If it is not required to convert nonbond_params parameters, is it required to call these parameters without conversion. Any suggestion is appreciated, thank you in advance. With best regards, Mulpuri.
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