intelandamd wrote:
Dear
I want to add extra LJ and electrostatic interactions for 1-2 or 1-3 interactions between pairs of atoms in the [ pairs ] section and do free energy calculations by perturbing these interactions. If it is possible, how can I do that.Thank you.

You start by reading chapters 4 and 5 of the manual closely, try some simple things for yourself and come back to the mailing list when you have focused questions :-)

Mark
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