Dear gmx users,
I am trying to build DOPC lipid bilayer
using genconf command. The head groups in bilayer are
not coming in horizontal position. i.e all head groups
are coming like as slop.
here i am giving commands and options used to build a
bilayer:
editconf -f dopc_min.pdb -o dopc_min-cen.pdb -box 1 3
1 -d 1 -c 1
genconf -f dopc_min-cen.pdb -o dopc_layer.pdb -nbox 6
6 1 -nmolat 53
Can anyone give me the detail procedure for creating
lipid bilayer. Any suggestions is appreciated.
Thanks in advance,
with best regards,
Nagaraja Mulpuri.
__________________________________________________
Do You Yahoo!?
Tired of spam? Yahoo! Mail has the best spam protection around
http://mail.yahoo.com
_______________________________________________
gmx-users mailing list gmx-users@gromacs.org
http://www.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at http://www.gromacs.org/search before posting!
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to [EMAIL PROTECTED]
Can't post? Read http://www.gromacs.org/mailing_lists/users.php
