Sunny wrote:
Hi,
I am trying to run my simulation using parallel Gmx 3.3.1 on a cluster
with Linux 2.6.9-42.0.3.ELsmp, gcc 3.4.6 and ScaliMPI. My simulation
causes abortion with the following error message:
--- mpimon --- Aborting run after process-3 terminated abnormally
Childprocess 26151 exited with exitcode 0 ---
Each time it reports a different process being terminated such as
process-1 or process-10 in addition to the process-3 as above.
The Gmx examples such as tutor/water can be run on this system.
So what's different between them and your attempted simulation?
Also, my simulation has successfully run on another system under Gmx
3.3.1 parallel run.
I'd like to know what causes the abortion in my simulation on this
system. Is it caused by ScaliMPI?
We can't tell yet.
Mark
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