When I wanted to analysis the hbond interaction between the protein and the dppc headgroup, I got the following error:
Program g_hbond, VERSION 3.3.1
Source code file: gmx_hbond.c, line: 631
Fatal error:
Your computational box has shrunk too much.
g_hbond can not handle this situation, sorry.
I found that if I set -e and -b option, for example, first I use g_hbond -e 2050, then use g_hbond -b 2050, I can get through the problem.
Was there something I did wrong here?
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