Hi Ninoo,
You can hack the code of gmx_rms.c in [GMXSRCDIR]/src/tools/ to output
the matrix generated into a human readable format. It is also possible
to write a raw binary file which can easily be processed using a
scripting language such as python (use g_rms -bin).
Best,
Tsjerk
On 9/27/06, ninoo mani <[EMAIL PROTECTED]> wrote:
Dear Mark
I read the manual but I could not find any option to
get the original values of the matrix. I will be
highly appreciative if you can help.
thanks
Ninoo Mani
--- Mark Abraham <[EMAIL PROTECTED]> wrote:
> > Dear all
> >
> > I run g_rms with -m option that produces a matrix
> in
> > .xpm format. Is it possible somehow to obtain raw
> data
> > i.e. the real numerical values of the elements of
> the
> > matrix?
>
> man g_rms
>
> Mark
>
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--
Tsjerk A. Wassenaar, Ph.D.
Groningen Biomolecular Sciences and Biotechnology Institute (GBB)
Dept. of Biophysical Chemistry
University of Groningen
Nijenborgh 4
9747AG Groningen, The Netherlands
+31 50 363 4336
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