Hi Kanin,
The only way to get away with that is to merge your two parts to form
one molecule, with the only connection being a distance_restraint (or
another bonded term if you want to emulate bond-like behaviour such as
a salt-bridge).
Best,
Tsjerk
On 9/11/06, kanin wichapong <[EMAIL PROTECTED]> wrote:
Dear All
I would like to know how to constraint the distance between the
different molecule, ex. the ligand and the protein. As far as I know
whatever to do the constraint, distance, angle dihedral, it can do just in
the same molecule.
Thank you in advance for all of your help.
With Best all regard,
Kanin
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Tsjerk A. Wassenaar, M.Sc.
Groningen Biomolecular Sciences and Biotechnology Institute (GBB)
Dept. of Biophysical Chemistry
University of Groningen
Nijenborgh 4
9747AG Groningen, The Netherlands
+31 50 363 4336
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