Dear All .. 
I have only recently started the GROMACS package. I want to run a MD simulation in vacuum for 5 ns say. I have tried to edit the demo file which comes with the GROMACS package. but Some how it give an error. Which I am still unable to solve. I am atttaching the file under this. Could any one please help me to move further. 
I am able to generate the .gro file and am able to run the pdb2gmx. 
Many thanks in advance
Nav

Attachment: demo_vaccum
Description: Binary data




*******************************************
Navratna Vajpai
Ph. D student in Prof. Grzesiek's laboratory
Department of Structural Biology
Biozentrum, University of Basel
Klingelbergstrasse 70,
CH-4056
Basel, Switzerland.
Phone- +41 61 267 2080(O)
       +41 78 744 0810(M)




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