Dear Gromacs users,
When I use g_h2order -f traj.xtc -n index.ndx -s XXX.tpr -d Z -o order.xvg to analyze the orientation of water molecules with respect to the normal in Z direction, I found there are 5 columns in order.xvg. They are xaxis label "box (nm)" yaxis label "mu_x, mu_y, mu_z (D), cosine with normal" Can you please let me know what mu_x, mu_y, mu_z (D) represent? Kind regards, J. Zhang _______________________________________________ gmx-users mailing list [email protected] http://www.gromacs.org/mailman/listinfo/gmx-users Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
