so, if i observe in md.log an exchange like:
"Repl ex  0    1    2 x   3" for e.g. time step 1
that would convert into:
"1      0   1   3   2"
for remd.xvg. is that correct?

the way you translate looks reasonable but I never used
the version (?) you use so I won't be able to comment
more.

the problem is, if i do something like this for the entire time scale trjcat only outputs the simulation box but no coordinates to the new trajectory.

Other users should be able to help ...

XAvier
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