I use interaction energy to estimate the interaction forces between the molecules.... When the course of Potential (or DNA1-DNA2.......) is constant, I use these values for estimate interaction forces. So I'm using equilibrium value, isn't it? What can I do? is the file pull.pdo the only other way to estimate the forces?
Thanks
Beniamino

Mark Abraham ha scritto:
Beniamino Sciacca wrote:
Ok....
another question: I use constraint pull code... is there some problem in estimating interaction energy?

Only if you want equilibrium values :-)

Mark
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