Dear GMXIONS,
I have simulated RNA, and later docked ligand to the ensemble of
average structure of RNA during some desired
time steps. Now I wish to compute the solvent accessbility of ligand in
the active site of a RNA. Is there a way
within the gromacs to do it either directly or indirectly. If not within
GROMACS , kindly give me the direction to do the same in any of
publicaly avilable software.
With thanks !
B.Nataraj
--
raja
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