Prasad Gajula wrote:
Dear Gromacs Users,
When I use the genbox after editconf , most of the protein is out of water.
Even with 'trjconv' after the simulations I cant see any change, as
suggested by other gromacs users.
Pls some one give me an idea...
thank you very much!
best regards
Gajula
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Hi Gajula,
maybe a stupid question, but: is your simulation box larger than the
protein itself, as it has to be?
Steffen
--
Dipl.-Chem. Steffen Wolf
Department of Biophysics
University of Bochum
ND 04/67
44780 Bochum
Germany
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