Looking at xmgrace graphics of temperature in function of time I clearly observe that the temperature in my 200,0 ps simulation was almost always between 261 K and 263,5K. Looking then the file md_T.xvg (file of temperature values during the time, that I got using g_energy), only the 0,1 first ps had different values next to 280 K, and all the other values where between 261 K and 263,5K. That is the very beggining, it should not affect that much the average.
However, the average that I got from g_energy was 264,694 K. I really can not understand why this difference, it should be some value between 261 K and 263,5K. Is it a bug from g_energy? Should I trust in this average even knowing that the temperature accordind to the temperature file didn´t reached this value?? I wait for kind informations.
Thanks for your attention,
Best regards,
Fernando Mattio
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