HI, I have run an Md simulation of the Wild-type and the mutant forms of a protein. I would like to analyze the simulations for any structural changes that might have occured upon mutation. I have carried out the usual rmsd and rmsf analysis and observe changes. I want to know whether there is any to look at changes in side chain interaction during the simulation. Thanks a lot Sincerely
Sekar Ramachandran Research Associate 316 Baker Laboratories DEpartment of Chemistry and Chemical Biology Cornell University Ithaca 14853 phone:607-254-6767 __________________________________________________ Do You Yahoo!? Tired of spam? Yahoo! Mail has the best spam protection around http://mail.yahoo.com _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
