I've looked into this a bit and I think this is a bug in Webstorm.
Webstorm saves files a lot without you actually hitting save, so
that's why I didn't put 2 and 2 together. It appears that any file
change in Webstorm is screwing up the permissions on git's index --
but only in 64b Ubuntu, it wasn't happening in 32b.

On Fri, Aug 9, 2013 at 10:00 AM, Justin Collum <jcol...@gmail.com> wrote:
>> That doesn't make sense.  If you are the owner of the file, why do you need 
>> sudo???
>
> I've just never seen a chmod command without sudo. I assumed it was
> needed. Is this relevant to the bug that I'm seeing?
>
> On Fri, Aug 9, 2013 at 5:40 AM, Andreas Schwab <sch...@linux-m68k.org> wrote:
>> Justin Collum <jcol...@gmail.com> writes:
>>
>>>      sudo chmod 644 ./.git/index
>>
>> That doesn't make sense.  If you are the owner of the file, why do you
>> need sudo???
>>
>> Andreas.
>>
>> --
>> Andreas Schwab, sch...@linux-m68k.org
>> GPG Key fingerprint = 58CA 54C7 6D53 942B 1756  01D3 44D5 214B 8276 4ED5
>> "And now for something completely different."
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