Hi Frank,

I would test if table name without the dot would work better. Give some other 
name with -nln


ogr2ogr -f GPKG mossel.gpkg "PG:dbname='#DB-name#' host='#Host-IP#' port=#Port# 
user='#User-name#' password='#Password#'" 
"mosselenoesterhabitats.mosselenoesterhabitats" -nln name_without_a_dot.


The table name that you have requires double quotes in SQL. This tries to find 
table

mosselenoesterhabitats from database mosselenoesterhabitats

select * from mosselenoesterhabitats.mosselenoesterhabitats;


SQL that works with your table would look like

select * from "mosselenoesterhabitats.mosselenoesterhabitats";



-Jukka Rahkonen-


________________________________
Lähettäjä: Andrea Aime <andrea.a...@geo-solutions.it>
Lähetetty: 21. lokakuuta 2017 12:14
Vastaanottaja: Steggink, Frank
Kopio: geoserver-users@lists.sourceforge.net
Aihe: Re: [Geoserver-users] Issues with Geopackage support?

Hi Frank,
at least part of the issues you're seeing seem to be related to running inside 
docker.
Can you do tests on the native OS instead, to check if they are reproducable?

As for a test file, yep, if you could make it available it would be nice, 
someone else could run tests too.

Cheers
Andrea


On Fri, Oct 20, 2017 at 4:33 PM, Steggink, Frank 
<frank.stegg...@kadaster.nl<mailto:frank.stegg...@kadaster.nl>> wrote:
Hi,

I’m investigating to serve Geopackages through Geoserver 2.12. We are using 
Docker, with Geoserver 2.12.0 and Tomcat 8.5.20. I just started experimenting 
with Geopackage, using Geoserver 2.11 and the Geopackage plugin, when Geoserver 
2.12 was released with core support for Geopackage.

With the old setup I was able to serve Geopackages, although the performance 
was disappointing, because Geotools version 17 didn’t support the spatial index 
from Geopackage. So I’m glad to notice that spatial index support was added to 
2.12 as well (https://osgeo-org.atlassian.net/browse/GEOT-5826). Your release 
notes (http://blog.geoserver.org/2017/10/17/geoserver-2-12-0-released/) seem to 
be outdated: “Currently, GeoPackage vector does not support spatial indexes but 
stay tuned, it’s cooking!”

Anyways, it is possible that some of the issues I’m mentioning are due to our 
setup and because we’re just dipping our toes in the water when it comes to 
Geopackage. My apologies if that turns out to be the case, although I did make 
sure that this was not the case. I also decided to write this e-mail first, 
before setting out for Jira straight ahead.

First of all, I’m having difficulties adding a new geopackage store. I’m adding 
a new datastore by just specifying the data source name and the database file 
(SQLite file), using the file browser. In the GEOSERVER_DATA_DIR (which is at 
/data in my container) I’ve created a subdirectory, also called “data”, which 
is mounted as a volume from the host into my Docker container. Because it is a 
subdirectory of the Geserver data dir, I’m getting the following relative path: 
file:data/mossel.gpkg. Since there are no other mandatory parameters (the 
namespace comes from my workspace), I just click “Save”, but the following 
error message appears: Error creating data store, check the parameters. Error 
message: Unable to obtain connection: Cannot create PoolableConnectionFactory 
(path to 'data/mossel.gpkg': '/usr/local/tomcat/data' does not exist). The 
directory /usr/local/tomcat is the Tomcat (Catalina) base dir. When creating a 
symbolic link from /usr/local/tomcat to /data/data (by executing the command ln 
-s /data/data from within /usr/local/tomcat), I’m not getting this error 
message anymore. So I’m fairly certain that this issue is not caused by my 
particular setup. My guess is that when the connection to the SQLite database 
is being set up, the relative path is not prefixed by the Geoserver data dir.

My second issue occurs when I’m publishing the only layer which is contained in 
my geopackage. I’ve just calculated the bbox and WGS84 bbox, and press Save. 
When using WMS or WFS, my layer shows up in the Capabilities document. However, 
when executing a GetMap request, I’m getting a service exception:

<?xml version="1.0" encoding="UTF-8"?><ServiceExceptionReport version="1.3.0" 
xmlns="http://www.opengis.net/ogc"; 
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"; 
xsi:schemaLocation="http://www.opengis.net/ogc 
http://localhost:8080/geoserver/schemas/wms/1.3.0/exceptions_1_3_0.xsd";>   
<ServiceException code="internalError">
      Rendering process failed
java.io.IOExceptionBorrow prepareStatement from pool failed
[SQLITE_ERROR] SQL error or missing database (no such table: 
rtree_mosselenoesterhabitats.mosselenoesterhabitats_geom)
</ServiceException></ServiceExceptionReport>

My apologies for the unwieldy layer name. I’m getting a similar service 
exception when doing a WFS GetFeature request. When accessing my geopackage 
with the sqlite3 CLI I’m seeing this table (and also the main table) with the 
.tables command. But when doing a count on this table (or the main table), I’m 
also getting a “no such table” exception. I’m getting a count when enclosing 
the table name within double quotes, like: select count(*) from 
"rtree_mosselenoesterhabitats.mosselenoesterhabitats_geom". (The result is 577.)

I have created this geopackage with OGR 2.2 
(http://www.gdal.org/drv_geopackage.html) as an export of a PostGIS table using 
the following command: ogr2ogr -f GPKG mossel.gpkg "PG:dbname='#DB-name#' 
host='#Host-IP#' port=#Port# user='#User-name#' password='#Password#'" 
"mosselenoesterhabitats.mosselenoesterhabitats". In case anyone is interested, 
I can share this geopackage. As a workaround I recreated the geopackage by 
appending -nln mosselenoesterhabitats to my OGR command. I don’t care about the 
schema name.

And lastly, I’ve also found a weird issue when putting my geopackage in the 
Geoserver data dir itself (/data, not mounted as a Docker volume), and adding 
it as a store. The database setting at the connection parameters is just 
“file:mossel.gpkg”. When clicking Save, I’m getting an overview of the layers I 
wish to publish, but it is showing no layers. I’m also not seeing any errors. 
When adding a new layer and selecting the geopackage store, I’m also getting an 
empty list of layers. I could provide a screenshot if necessary. I’m able to 
reproduce this issue on a Windows 7 machine with the standard Geoserver 2.12.0 
installation, and putting the geopackage in the data dir. (Because the data dir 
is still in c:\program files (standard), I had to start Geoserver as 
administrator, because the JDBC driver needs write access to this dir.)

Is anyone able to confirm these issues, and, if this is the case, what would be 
the best way to go forward? Next week I might be able to create some patches. 
Please let me know if more information is required (data, screenshots). With 
regard to my own work, there is no blocking issue because of the workarounds. 
They might be useful to someone else who is looking into serving Geopackage 
files with Geoserver.

Thank you in advance,

Frank Steggink
Kadaster PDOK


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