Hi, I corrected and implemented what you suggested. Anything left over to correct?
Thanks justin P.s. the enable-64 thing will be fixed in the emboss ebuild
# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/eclass/embassy.eclass,v 1.17 2008/11/03
22:17:50 ribosome Exp $
# Creator of the original eclass
# Author Olivier Fisette <ofise...@gmail.com>
#
# Author of the next generation eclass
# Justin Lecher <j...@gentoo.org>
# @ECLASS: emboss.eclass
# @MAINTAINER:
# sci-biol...@gentoo.org
# j...@gentoo.org
# @BLURB: Use this to easy install EMBOSS and EMBASSY programs (EMBOSS add-ons).
# @DESCRIPTION:
# The inheriting ebuild must set EAPI=4 and provide EBO_DESCRIPTION before the
inherit line.
# KEYWORDS should be set. Additionally "(R|P)DEPEND"encies and other standard
# ebuild Variables can be extended (FOO+=" bar").
# Default installation of following DOCS="AUTHORS ChangeLog NEWS README"
#
# Example:
#
# EAPI="4"
#
# EBO_DESCRIPTION="applications from the CBS group"
#
# inherit emboss
#
# KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos"
# @ECLASS-VARIABLE: EBO_DESCRIPTION
# @DESCRIPTION:
# Should be set. Completes the generic description of the embassy module as
follows:
#
# EMBOSS integrated version of ${EBO_DESCRIPTION},
# e.g.
# "EMBOSS integrated version of applications from the CBS group"
#
# Defaults to the upstream name of the module.
# @ECLASS-VARIABLE: EBO_EAUTORECONF
# @DESCRIPTION:
# Set to 'no', if you don't want eautoreconf to be run after patching.
: ${EBO_EAUTORECONF:="yes"}
# @ECLASS-VARIABLE: EBO_EXTRA_ECONF
# @DEFAULT_UNSET
# @DESCRIPTION:
# Extra config options passed to econf, similar to EXTRA_ECONF.
case ${EAPI:-0} in
4) ;;
*) die "this eclass doesn't support < EAPI 4" ;;
esac
inherit autotools eutils multilib
HOMEPAGE="http://emboss.sourceforge.net/";
LICENSE="LGPL-2 GPL-2"
SLOT="0"
IUSE="mysql pdf png postgres static-libs X"
DEPEND="
dev-libs/expat
dev-libs/libpcre:3
sci-libs/plplot
sys-libs/zlib
mysql? ( dev-db/mysql )
pdf? ( media-libs/libharu )
png? ( media-libs/gd[png] )
postgres? ( dev-db/postgresql-base )
X? ( x11-libs/libXt )"
RDEPEND="${DEPEND}"
if [[ ${PN} == embassy-* ]]; then
# The EMBASSY package name, retrieved from the inheriting ebuild's name
EN=${PN:8}
# The full name and version of the EMBASSY package (excluding the Gentoo
# revision number)
EF=$(echo ${EN} | tr "[:lower:]" "[:upper:]")-${PV}
: ${EBO_DESCRIPTION:=${EN}}
DESCRIPTION="EMBOSS integrated version of ${EBO_DESCRIPTION}"
SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/${EF}.tar.gz ->
embassy-${EN}-${PV}.tar.gz"
DEPEND+="
>=sci-biology/emboss-6.3.1_p4[mysql=,pdf=,png=,postgres=,static-libs=,X=]"
S="${WORKDIR}"/${EF}
fi
DOCS="AUTHORS ChangeLog NEWS README"
# @FUNCTION: emboss_src_prepare
# @DESCRIPTION:
# Does following things
#
# 1. Patches with "${FILESDIR}"/${PF}.patch, of present
# 2. Runs eautoreconf, unless EBO_EAUTORECONF is set to no
#
emboss_src_prepare() {
[[ -f "${FILESDIR}"/${PF}.patch ]] && epatch "${FILESDIR}"/${PF}.patch
[[ ${EBO_EAUTORECONF} == yes ]] && eautoreconf
}
# @FUNCTION: emboss_src_configure
# @DESCRIPTION:
# runs econf with following options. Extra options can be passed by setting
EBO_EXTRA_ECONF
#
# $(use_with X x)
# $(use_with png pngdriver)
# $(use_with pdf hpdf)
# $(use_with mysql mysql)
# $(use_with postgres postgresql)
# $(use_enable static-libs static)
# --enable-large
# --without-java
# --enable-systemlibs
# --docdir="${EPREFIX}/usr/share/doc/${PF}/"
# ${EBO_EXTRA_ECONF}
emboss_src_configure() {
econf \
$(use_with X x) \
$(use_with png pngdriver) \
$(use_with pdf hpdf) \
$(use_with mysql mysql) \
$(use_with postgres postgresql) \
$(use_enable static-libs static) \
--enable-large \
--without-java \
--enable-systemlibs \
--docdir="${EPREFIX}/usr/share/doc/${PF}/" \
${EBO_EXTRA_ECONF}
}
EXPORT_FUNCTIONS src_prepare src_configure
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