commit: fea9570c8c2206218e474d15d0637d1ac95c9311 Author: Justin Lecher <jlec <AT> gentoo <DOT> org> AuthorDate: Wed Feb 18 13:45:40 2015 +0000 Commit: Justin Lecher <jlec <AT> gentoo <DOT> org> CommitDate: Wed Feb 18 13:45:40 2015 +0000 URL: http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=fea9570c
sci-biology/trimmomatic: fix SLOT operators Package-Manager: portage-2.2.17 --- sci-biology/trimmomatic/ChangeLog | 3 +++ sci-biology/trimmomatic/trimmomatic-0.32.ebuild | 14 +++++++------- 2 files changed, 10 insertions(+), 7 deletions(-) diff --git a/sci-biology/trimmomatic/ChangeLog b/sci-biology/trimmomatic/ChangeLog index 119ca3f..010e50b 100644 --- a/sci-biology/trimmomatic/ChangeLog +++ b/sci-biology/trimmomatic/ChangeLog @@ -2,6 +2,9 @@ # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ + 18 Feb 2015; Justin Lecher <j...@gentoo.org> trimmomatic-0.32.ebuild: + sci-biology/trimmomatic: fix SLOT operators + *trimmomatic-0.32 (22 Jan 2015) 22 Jan 2015; Martin Mokrejs <mmokr...@fold.natur.cuni.cz> +metadata.xml, diff --git a/sci-biology/trimmomatic/trimmomatic-0.32.ebuild b/sci-biology/trimmomatic/trimmomatic-0.32.ebuild index 662ceea..c29b9c0 100644 --- a/sci-biology/trimmomatic/trimmomatic-0.32.ebuild +++ b/sci-biology/trimmomatic/trimmomatic-0.32.ebuild @@ -8,7 +8,8 @@ inherit java-pkg-2 java-ant-2 DESCRIPTION="Illumina adapter trimming tool" HOMEPAGE="http://www.usadellab.org/cms/?page=trimmomatic"; -SRC_URI="http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/Trimmomatic-Src-0.32.zip +SRC_URI=" + http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/Trimmomatic-Src-0.32.zip http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/TrimmomaticManual_V0.32.pdf -> "${P}"_manual.pdf" # http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/Trimmomatic-0.32.zip @@ -18,10 +19,9 @@ SLOT="0" KEYWORDS="~amd64" IUSE="" -DEPEND=">=virtual/jdk-1.6 +DEPEND=">=virtual/jdk-1.6:* dev-java/ant-core" -RDEPEND="${DEPEND} - >=virtual/jre-1.6" +RDEPEND=">=virtual/jre-1.6:*" # somehow fails to build with oracle-jdk-bin-1.7 while ibm-jdk-bin-1.6 works @@ -29,8 +29,8 @@ EANT_BUILD_TARGET="dist" src_install() { java-pkg_newjar "dist/jar/${P}.jar" "${PN}.jar" - insinto /usr/share/"${PN}"/Illumina + insinto /usr/share/${PN}/Illumina doins adapters/*.fa - insinto /usr/share/doc/"${P}" - dodoc "${DISTDIR}"/"${P}"_manual.pdf + insinto /usr/share/doc/${P} + dodoc "${DISTDIR}"/${P}_manual.pdf }
