commit:     214c303c7d361313ee0c5af916085d6201163d99
Author:     Christoph Junghans <ottxor <AT> gentoo <DOT> org>
AuthorDate: Thu Feb 12 00:43:39 2015 +0000
Commit:     Christoph Junghans <ottxor <AT> gentoo <DOT> org>
CommitDate: Thu Feb 12 00:43:39 2015 +0000
URL:        http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=214c303c

added support of hdf5, clean up

Package-Manager: portage-2.2.14

---
 sci-chemistry/votca-csg/ChangeLog             |  5 +++-
 sci-chemistry/votca-csg/votca-csg-9999.ebuild | 39 +++++++++------------------
 2 files changed, 16 insertions(+), 28 deletions(-)

diff --git a/sci-chemistry/votca-csg/ChangeLog 
b/sci-chemistry/votca-csg/ChangeLog
index 621aa69..b4fa4f4 100644
--- a/sci-chemistry/votca-csg/ChangeLog
+++ b/sci-chemistry/votca-csg/ChangeLog
@@ -1,7 +1,10 @@
 # ChangeLog for sci-chemistry/votca-csg
-# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  12 Feb 2015; Christoph Junghans <ott...@gentoo.org> votca-csg-9999.ebuild:
+  added support of hdf5, clean up
+
   24 Oct 2014; Christoph Junghans <ott...@gentoo.org> votca-csg-9999.ebuild:
   fixed bash-comp (bug #526320)
 

diff --git a/sci-chemistry/votca-csg/votca-csg-9999.ebuild 
b/sci-chemistry/votca-csg/votca-csg-9999.ebuild
index 94f2fc0..0b0b5be 100644
--- a/sci-chemistry/votca-csg/votca-csg-9999.ebuild
+++ b/sci-chemistry/votca-csg/votca-csg-9999.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2014 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 # $Header: $
 
@@ -8,7 +8,7 @@ CMAKE_MAKEFILE_GENERATOR="ninja"
 
 inherit bash-completion-r1 cmake-utils multilib
 
-IUSE="doc examples extras +gromacs"
+IUSE="doc examples extras +gromacs hdf5"
 PDEPEND="extras? ( =sci-chemistry/${PN}apps-${PV} )"
 if [ "${PV}" != "9999" ]; then
        SRC_URI="http://downloads.votca.googlecode.com/hg/${P}.tar.gz
@@ -30,12 +30,13 @@ SLOT="0"
 
 RDEPEND="=sci-libs/votca-tools-${PV}
        gromacs? ( sci-chemistry/gromacs:= )
+       hdf5? ( sci-libs/hdf5[cxx] )
        dev-lang/perl
        app-shells/bash"
 
 DEPEND="${RDEPEND}
        doc? (
-               || ( <app-doc/doxygen-1.7.6.1[-nodot] 
>=app-doc/doxygen-1.7.6.1[dot] )
+               app-doc/doxygen[dot]
                dev-texlive/texlive-latexextra
                virtual/latex-base
                dev-tex/pgf
@@ -53,7 +54,7 @@ src_unpack() {
                use doc && mercurial_fetch \
                        https://code.google.com/p/votca.csg-manual/ \
                        votca.csg-manual \
-                       "${WORKDIR}/manual"
+                       "${WORKDIR}/${PN}-manual"
                use examples && mercurial_fetch \
                        https://code.google.com/p/votca.csg-tutorials/ \
                        votca.csg-tutorials \
@@ -62,23 +63,9 @@ src_unpack() {
 }
 
 src_configure() {
-       local GMX_DEV="OFF" GMX_DOUBLE="OFF" extra
-
-       if use gromacs; then
-               has_version =sci-chemistry/gromacs-9999 && GMX_DEV="ON"
-               has_version sci-chemistry/gromacs[double-precision] && 
GMX_DOUBLE="ON"
-       fi
-
-       #to create man pages, build tree binaries are executed (bug #398437)
-       [[ ${CHOST} = *-darwin* ]] && \
-               extra+=" -DCMAKE_BUILD_WITH_INSTALL_RPATH=OFF"
-
        mycmakeargs=(
                $(cmake-utils_use_with gromacs GMX)
-               -DWITH_GMX_DEVEL="${GMX_DEV}"
-               -DGMX_DOUBLE="${GMX_DOUBLE}"
-               -DCMAKE_INSTALL_RPATH="\\\$ORIGIN/../$(get_libdir)"
-               ${extra}
+               $(cmake-utils_use_with hdf5 H5MD)
                -DWITH_RC_FILES=OFF
                -DLIB=$(get_libdir)
        )
@@ -94,18 +81,16 @@ src_install() {
        done
        if use doc; then
                if [[ ${PV} = *9999* ]]; then
-                       pushd "${WORKDIR}"/manual
+                       #we need to do that here, because we need an installed 
version of csg to build the manual
                        [[ ${CHOST} = *-darwin* ]] && \
-                               export 
DYLD_LIBRARY_PATH="${DYLD_LIBRARY_PATH}${DYLD_LIBRARY_PATH:+:}${ED}/usr/$(get_libdir)"
-                       emake PATH="${PATH}${PATH:+:}${ED}/usr/bin"
-                       newdoc manual.pdf "${PN}-manual-${PV}.pdf"
-                       popd > /dev/null
+                               emake -C "${WORKDIR}/${PN}"-manual 
PATH="${PATH}${PATH:+:}${ED}/usr/bin" 
DYLD_LIBRARY_PATH="${DYLD_LIBRARY_PATH}${DYLD_LIBRARY_PATH:+:}${ED}/usr/$(get_libdir)"
 \
+                               || emake -C "${WORKDIR}/${PN}"-manual 
PATH="${PATH}${PATH:+:}${ED}/usr/bin" 
LD_LIBRARY_PATH="${LD_LIBRARY_PATH}${LD_LIBRARY_PATH:+:}${ED}/usr/$(get_libdir)"
+                       newdoc "${WORKDIR}/${PN}"-manual/manual.pdf 
"${PN}-manual-${PV}.pdf"
                else
                        dodoc "${DISTDIR}/${PN}-manual-${PV}.pdf"
                fi
-               cd "${CMAKE_BUILD_DIR}" || die
-               cmake-utils_src_make html
-               dohtml -r share/doc/html/*
+               cmake-utils_src_make -C "${CMAKE_BUILD_DIR}" html
+               dohtml -r "${CMAKE_BUILD_DIR}"/share/doc/html/*
        fi
        if use examples; then
                insinto "/usr/share/doc/${PF}/tutorials"

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