commit: 54f2d948f5441b0a67dd18b46e77c918bf7c7b33 Author: Justin Lecher <jlec <AT> gentoo <DOT> org> AuthorDate: Mon Nov 10 14:41:24 2014 +0000 Commit: Justin Lecher <jlec <AT> gentoo <DOT> org> CommitDate: Mon Nov 10 14:41:24 2014 +0000 URL: http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=54f2d948
sci-biology/mrbayes: Bump EAPI Package-Manager: portage-2.2.14 --- sci-biology/mrbayes/ChangeLog | 6 +++++- sci-biology/mrbayes/metadata.xml | 4 ++-- sci-biology/mrbayes/mrbayes-3.1.2-r1.ebuild | 10 +++++----- 3 files changed, 12 insertions(+), 8 deletions(-) diff --git a/sci-biology/mrbayes/ChangeLog b/sci-biology/mrbayes/ChangeLog index 7c54e60..0d081c1 100644 --- a/sci-biology/mrbayes/ChangeLog +++ b/sci-biology/mrbayes/ChangeLog @@ -1,7 +1,11 @@ # ChangeLog for sci-biology/mrbayes -# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 # $Header: /var/cvsroot/gentoo-x86/sci-biology/mrbayes/ChangeLog,v 1.19 2008/06/11 18:10:48 ken69267 Exp $ + 10 Nov 2014; Justin Lecher <j...@gentoo.org> mrbayes-3.1.2-r1.ebuild, + metadata.xml: + Bump EAPI + 25 Jun 2011; Justin Lecher <j...@gentoo.org> mrbayes-3.1.2-r1.ebuild, metadata.xml: RDEPEND is not explicitly assigned -> fixed diff --git a/sci-biology/mrbayes/metadata.xml b/sci-biology/mrbayes/metadata.xml index 102b1ec..9b0503f 100644 --- a/sci-biology/mrbayes/metadata.xml +++ b/sci-biology/mrbayes/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> <pkgmetadata> - <herd>sci-biology</herd> - <longdescription> + <herd>sci-biology</herd> + <longdescription> MrBayes is a program for the Bayesian estimation of phylogeny. Bayesian inference of phylogeny is based upon a quantity called the posterior probability distribution of trees, which is the probability of a diff --git a/sci-biology/mrbayes/mrbayes-3.1.2-r1.ebuild b/sci-biology/mrbayes/mrbayes-3.1.2-r1.ebuild index 05469a2..b83d6cf 100644 --- a/sci-biology/mrbayes/mrbayes-3.1.2-r1.ebuild +++ b/sci-biology/mrbayes/mrbayes-3.1.2-r1.ebuild @@ -2,6 +2,8 @@ # Distributed under the terms of the GNU General Public License v2 # $Header: $ +EAPI=5 + inherit eutils mpi toolchain-funcs DESCRIPTION="Bayesian Inference of Phylogeny" @@ -18,9 +20,7 @@ DEPEND=" readline? ( sys-libs/readline )" RDEPEND="${DEPEND}" -src_unpack() { - unpack ${A} - cd "${S}" +src_prepare() { sed \ -e "s:OPTFLAGS ?= -O3:CFLAGS = ${CFLAGS}:" \ -e "s:CC = gcc:CC = $(tc-getCC):" \ @@ -42,9 +42,9 @@ src_unpack() { src_compile() { mpi_pkg_set_env - emake || die + emake } src_install() { - mpi_dobin mb || die "Installation failed." + mpi_dobin mb }
