commit: 0b5d0f6dc01ee66b5ec4f4e22a971c055948558d Author: Alessandro Barbieri <lssndrbarbieri <AT> gmail <DOT> com> AuthorDate: Wed Sep 29 14:25:27 2021 +0000 Commit: Alessandro Barbieri <lssndrbarbieri <AT> gmail <DOT> com> CommitDate: Wed Sep 29 14:25:27 2021 +0000 URL: https://gitweb.gentoo.org/repo/proj/guru.git/commit/?id=0b5d0f6d
sys-cluster/parallel-netcdf: initial import Signed-off-by: Alessandro Barbieri <lssndrbarbieri <AT> gmail.com> sys-cluster/parallel-netcdf/Manifest | 1 + sys-cluster/parallel-netcdf/metadata.xml | 25 +++++++ .../parallel-netcdf/parallel-netcdf-1.12.2.ebuild | 80 ++++++++++++++++++++++ 3 files changed, 106 insertions(+) diff --git a/sys-cluster/parallel-netcdf/Manifest b/sys-cluster/parallel-netcdf/Manifest new file mode 100644 index 000000000..eba2d268b --- /dev/null +++ b/sys-cluster/parallel-netcdf/Manifest @@ -0,0 +1 @@ +DIST pnetcdf-1.12.2.tar.gz 2355892 BLAKE2B ea94d63caa8d42b727084be0580c43e0ac03325acafb046a057092b41880a875a1ca04d1b0183062aed3d7182103217c02165c0f65e722b50129931fb7c93e82 SHA512 b482eadb4955a312fab885aa89c08817c010ed6ff69dff3cfa9c530f1b645b788973029909a8f6fd428170103cfa0784e1bfe085a48d9bcd2446dbd0d40ed67d diff --git a/sys-cluster/parallel-netcdf/metadata.xml b/sys-cluster/parallel-netcdf/metadata.xml new file mode 100644 index 000000000..de4248a59 --- /dev/null +++ b/sys-cluster/parallel-netcdf/metadata.xml @@ -0,0 +1,25 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <maintainer type="person"> + <description>comaintainers welcome</description> + <email>[email protected]</email> + <name>Alessandro Barbieri</name> + </maintainer> + <upstream> + <bugs-to>https://github.com/Parallel-NetCDF/PnetCDF/issues</bugs-to> + <remote-id type="github">Parallel-NetCDF/PnetCDF</remote-id> + </upstream> + <use> + <flag name="burst-buffering">Enable burst buffer driver support</flag> + <flag name="cxx">Turn on support for the C++ interface</flag> + <flag name="erange-fill">Disable use of fill value when out-of-range type conversion causes NC_ERANGE error</flag> + <flag name="fortran">Turn on support for the Fortran interface</flag> + <flag name="file-sync"> Disable MPI file sync if you know your file system can provide data consistency</flag> + <flag name="netcdf">Enable NetCDF-4 feature</flag> + <flag name="null-byte-header-padding">Enable check for null-byte header padding when reading files in classic formats</flag> + <flag name="relax-coord-bound">Use stricter rule for error NC_EINVALCOORDS to disallow coordinate start argument equal to dimension size when argument count is zero</flag> + <flag name="subfiling">Enable subfiling support</flag> + <flag name="threadsafe">Enable thread-safe capability</flag> + </use> +</pkgmetadata> diff --git a/sys-cluster/parallel-netcdf/parallel-netcdf-1.12.2.ebuild b/sys-cluster/parallel-netcdf/parallel-netcdf-1.12.2.ebuild new file mode 100644 index 000000000..456e0f5f8 --- /dev/null +++ b/sys-cluster/parallel-netcdf/parallel-netcdf-1.12.2.ebuild @@ -0,0 +1,80 @@ +# Copyright 1999-2010 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +FORTRAN_NEEDED=fortran +MYP="pnetcdf-${PV}" + +inherit fortran-2 + +DESCRIPTION="Parallel extension to netCDF" +HOMEPAGE=" + https://parallel-netcdf.github.io + http://cucis.ece.northwestern.edu/projects/PnetCDF + http://www-unix.mcs.anl.gov/parallel-netcdf +" +SRC_URI="http://cucis.ece.northwestern.edu/projects/PnetCDF/Release/${MYP}.tar.gz"; +S="${WORKDIR}/${MYP}" + +LICENSE="UCAR-Unidata" +SLOT="0" +KEYWORDS="~amd64" +IUSE="burst-buffering +cxx debug doc +erange-fill +file-sync +fortran netcdf +null-byte-header-padding +relax-coord-bound subfiling threadsafe" + +RDEPEND=" + netcdf? ( sci-libs/netcdf[mpi] ) + virtual/mpi +" +# adios? ( sys-cluster/adios ) +DEPEND="${RDEPEND}" +BDEPEND="doc? ( app-doc/doxygen )" + +pkg_setup() { + fortran-2_pkg_setup +} + +src_configure() { + export MPIF77=/usr/bin/mpif77 + export MPIF90=/usr/bin/mpif90 + + local myconf=( + --enable-shared + --with-mpi="${EPREFIX}/usr" + + $(use_enable burst-buffering) + $(use_enable cxx) + $(use_enable debug) + $(use_enable doc doxygen) + $(use_enable erange-fill) + $(use_enable file-sync) + $(use_enable fortran) + $(use_enable netcdf netcdf4) + $(use_enable null-byte-header-padding) + $(use_enable relax-coord-bound) + $(use_enable subfiling) + $(use_enable threadsafe thread-safe) + ) +# $(use_enable adios) +# if use adios; then +# myconf+=( "--with-adios=${EPREFIX}/usr" ) +# else +# myconf+=( "--without-adios" ) +# fi + if use netcdf; then + myconf+=( "--with-netcdf4=${EPREFIX}/usr" ) + else + myconf+=( "--without-netcdf4" ) + fi + + econf "${myconf[@]}" +} + +src_compile() { + emake +} + +src_install() { + emake DESTDIR="${D}" install +}
