commit: 946948c8d23cfdc67d6f877730a5a6986fdf94c7 Author: Jakov Smolic <jakov.smolic <AT> sartura <DOT> hr> AuthorDate: Sun Aug 22 19:37:17 2021 +0000 Commit: David Seifert <soap <AT> gentoo <DOT> org> CommitDate: Sun Aug 22 19:37:17 2021 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=946948c8
sci-biology/plink: Port to EAPI 8 Signed-off-by: Jakov Smolic <jakov.smolic <AT> sartura.hr> Signed-off-by: David Seifert <soap <AT> gentoo.org> sci-biology/plink/plink-1.90_pre140514.ebuild | 13 +++++++------ 1 file changed, 7 insertions(+), 6 deletions(-) diff --git a/sci-biology/plink/plink-1.90_pre140514.ebuild b/sci-biology/plink/plink-1.90_pre140514.ebuild index 578881ac0f5..2595c3ab798 100644 --- a/sci-biology/plink/plink-1.90_pre140514.ebuild +++ b/sci-biology/plink/plink-1.90_pre140514.ebuild @@ -1,36 +1,36 @@ # Copyright 1999-2021 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 -EAPI=5 +EAPI=8 inherit toolchain-funcs DESCRIPTION="Whole genome association analysis toolset" HOMEPAGE="http://pngu.mgh.harvard.edu/~purcell/plink/"; SRC_URI="http://pngu.mgh.harvard.edu/~purcell/static/bin/plink140514/plink_src.zip -> ${P}.zip" +S="${WORKDIR}" LICENSE="GPL-2" SLOT="0" KEYWORDS="~amd64 ~x86" -IUSE="" RDEPEND=" sys-libs/zlib virtual/cblas virtual/lapack " -DEPEND=" - ${RDEPEND} +DEPEND="${RDEPEND}" +BDEPEND=" app-arch/unzip virtual/pkgconfig " -S="${WORKDIR}/" - # Package collides with net-misc/putty. Renamed to p-link following discussion with Debian. # Package contains bytecode-only jar gPLINK.jar. Ignored, notified upstream. src_prepare() { + default + sed \ -e 's:zlib-1.2.8/zlib.h:zlib.h:g' \ -i *.{c,h} || die @@ -47,6 +47,7 @@ src_compile() { emake \ CXX=$(tc-getCXX) \ CFLAGS="${CFLAGS}" \ + LDFLAGS="${LDFLAGS}" \ ZLIB="$($(tc-getPKG_CONFIG) --libs zlib)" \ BLASFLAGS="$($(tc-getPKG_CONFIG) --libs lapack cblas)" }
