commit: 1e2eca70fc0fffc3a16875a71f27fddeb2252fba Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Fri May 12 22:18:05 2017 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Fri May 12 22:18:05 2017 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=1e2eca70
sci-biology/poretools: new package Package-Manager: Portage-2.3.5, Repoman-2.3.2 sci-biology/poretools/metadata.xml | 12 ++++++++++++ sci-biology/poretools/poretools-0.6.0.ebuild | 26 ++++++++++++++++++++++++++ 2 files changed, 38 insertions(+) diff --git a/sci-biology/poretools/metadata.xml b/sci-biology/poretools/metadata.xml new file mode 100644 index 000000000..f68a1b6fa --- /dev/null +++ b/sci-biology/poretools/metadata.xml @@ -0,0 +1,12 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <maintainer type="person"> + <email>mmokr...@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biol...@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/poretools/poretools-0.6.0.ebuild b/sci-biology/poretools/poretools-0.6.0.ebuild new file mode 100644 index 000000000..449d486db --- /dev/null +++ b/sci-biology/poretools/poretools-0.6.0.ebuild @@ -0,0 +1,26 @@ +# Copyright 1999-2017 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=6 + +PYTHON_COMPAT=( python2_7 ) + +inherit distutils-r1 + +DESCRIPTION="Tools for sequencing FAST5 data from Oxford Nanopore" +HOMEPAGE="https://poretools.readthedocs.io + https://github.com/arq5x/poretools"; +SRC_URI="https://github.com/arq5x/poretools/archive/v0.6.0.tar.gz -> ${P}.tar.gz" + +LICENSE="GPL-2" # https://github.com/arq5x/poretools/issues/136 +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND} + >=sci-libs/hdf5-1.8.7 + >=dev-python/h5py-2.2[${PYTHON_USEDEP}] + dev-python/matplotlib[${PYTHON_USEDEP}] + dev-python/seaborn[${PYTHON_USEDEP}] + dev-python/pandas[${PYTHON_USEDEP}]"
