commit: bf23d753b2e3a4e87bfc056b34a0c5b9a4c4dfd1 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Thu Apr 20 16:52:34 2017 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Thu Apr 20 16:52:34 2017 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=bf23d753
dev-python/pyvcf: new package Package-Manager: Portage-2.3.5, Repoman-2.3.2 dev-python/pyvcf/metadata.xml | 12 ++++++++++++ dev-python/pyvcf/pyvcf-0.6.8.ebuild | 23 +++++++++++++++++++++++ 2 files changed, 35 insertions(+) diff --git a/dev-python/pyvcf/metadata.xml b/dev-python/pyvcf/metadata.xml new file mode 100644 index 000000000..f68a1b6fa --- /dev/null +++ b/dev-python/pyvcf/metadata.xml @@ -0,0 +1,12 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer type="person"> + <email>mmokr...@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biol...@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/dev-python/pyvcf/pyvcf-0.6.8.ebuild b/dev-python/pyvcf/pyvcf-0.6.8.ebuild new file mode 100644 index 000000000..6138c17a6 --- /dev/null +++ b/dev-python/pyvcf/pyvcf-0.6.8.ebuild @@ -0,0 +1,23 @@ +# Copyright 1999-2017 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=6 + +PYTHON_COMPAT=( python2_7 python3_5 ) +inherit distutils-r1 + +DESCRIPTION="Work with VCF files in python" +HOMEPAGE="https://pypi.python.org/pypi/PyVCF" +SRC_URI="https://pypi.python.org/packages/20/b6/36bfb1760f6983788d916096193fc14c83cce512c7787c93380e09458c09/PyVCF-${PV}.tar.gz -> ${P}.tar.gz" + +LICENSE="pyvcf" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="" + +DEPEND=" + >=sci-biology/pysam-0.8.0 + dev-python/cython" +RDEPEND="${DEPEND}" + +S="${WORKDIR}"/PyVCF-"${PV}"