commit: 8abbc1e1b14cffd918be1051941fb0c90ac3db79 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Sun Feb 19 17:20:03 2017 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Sun Feb 19 17:20:03 2017 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=8abbc1e1
sci-biology/yaha: new package, does not respect CFLAGS/CXXFLAGS yet Package-Manager: Portage-2.3.3, Repoman-2.3.1 sci-biology/yaha/metadata.xml | 12 ++++++++++++ sci-biology/yaha/yaha-9999.ebuild | 28 ++++++++++++++++++++++++++++ 2 files changed, 40 insertions(+) diff --git a/sci-biology/yaha/metadata.xml b/sci-biology/yaha/metadata.xml new file mode 100644 index 000000000..f68a1b6fa --- /dev/null +++ b/sci-biology/yaha/metadata.xml @@ -0,0 +1,12 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <maintainer type="person"> + <email>mmokr...@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biol...@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/yaha/yaha-9999.ebuild b/sci-biology/yaha/yaha-9999.ebuild new file mode 100644 index 000000000..699e0276e --- /dev/null +++ b/sci-biology/yaha/yaha-9999.ebuild @@ -0,0 +1,28 @@ +# Copyright 1999-2017 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=6 + +inherit git-r3 + +DESCRIPTION="DNA mapper for single-end reads to detect structural variants (SV)" +HOMEPAGE="https://github.com/GregoryFaust/yaha"; +EGIT_REPO_URI="git://github.com/GregoryFaust/yaha.git" + +LICENSE="MIT" +SLOT="0" +KEYWORDS="" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND}" + +# TODO: respect CFLAGS/CXXFLAGS +# https://github.com/GregoryFaust/yaha/issues/5 + +src_install(){ + dobin bin/yaha + dodoc YAHA_User_Guide.0.1.83.pdf + dodoc README.md +}
