commit: 4ded557eeeef598731a54f12134b26083685a6e1 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Fri Jan 20 23:24:38 2017 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Fri Jan 20 23:24:38 2017 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=4ded557e
sci-biology/picard: still not working ebuild for current gradle-based build system https://github.com/broadinstitute/picard/issues/693 Package-Manager: Portage-2.3.3, Repoman-2.3.1 sci-biology/picard/picard-9999.ebuild | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/sci-biology/picard/picard-9999.ebuild b/sci-biology/picard/picard-9999.ebuild index a75aa88..e3f22b9 100644 --- a/sci-biology/picard/picard-9999.ebuild +++ b/sci-biology/picard/picard-9999.ebuild @@ -38,13 +38,13 @@ EANT_GENTOO_CLASSPATH="snappy-1.1,cofoja,commons-jexl-2,ant-core,htsjdk" java_prepare() { default - rm -r src/ src/test/java/* || die epatch "${FILESDIR}"/${PV}-build.xml.patch } src_compile(){ - # work around gradle writing $HOME/.gradle and requiring $HOME/.git + # work around gradle writing $HOME/.gradle, requiring $HOME/.git and $HOME/.m2/ # https://github.com/samtools/htsjdk/issues/660#issuecomment-232155965 + # make jure SDK-1.8 is available, JRE-1.8 is not enough GRADLE_USER_HOME="${WORKDIR}" ./gradlew || die }
