commit: 29f09c80275e0e14527e2e45e91f9aaed8f2af2b Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Mon Oct 3 17:47:40 2016 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Mon Oct 3 17:47:40 2016 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=29f09c80
sci-biology/bedtools: rewritten ebuild landed now in main tree (bug #594994) sci-biology/bedtools/bedtools-2.26.0.ebuild | 33 ----------------------------- sci-biology/bedtools/metadata.xml | 23 -------------------- 2 files changed, 56 deletions(-) diff --git a/sci-biology/bedtools/bedtools-2.26.0.ebuild b/sci-biology/bedtools/bedtools-2.26.0.ebuild deleted file mode 100644 index d796a3e..0000000 --- a/sci-biology/bedtools/bedtools-2.26.0.ebuild +++ /dev/null @@ -1,33 +0,0 @@ -# Copyright 1999-2016 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Id$ - -EAPI=5 - -inherit flag-o-matic - -DESCRIPTION="Tools for manipulation and analysis of BED, GFF/GTF, VCF, SAM/BAM file formats" -HOMEPAGE="https://github.com/arq5x/bedtools2"; -SRC_URI="https://github.com/arq5x/bedtools2/releases/download/v${PV}/bedtools-${PV}.tar.gz"; - -LICENSE="GPL-2" -SLOT="0" -KEYWORDS="~x86 ~amd64" -IUSE="" - -S="${WORKDIR}/bedtools2" - -src_prepare() { - filter-ldflags -Wl,--as-needed - sed -i \ - -e '/export CXXFLAGS/ d' \ - -e '/export CXX/ d' \ - Makefile || die -} - -src_install() { - dobin bin/* - dodoc README* RELEASE_HISTORY - insinto /usr/share/${PN} - doins -r genomes -} diff --git a/sci-biology/bedtools/metadata.xml b/sci-biology/bedtools/metadata.xml deleted file mode 100644 index 39869a9..0000000 --- a/sci-biology/bedtools/metadata.xml +++ /dev/null @@ -1,23 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> -<pkgmetadata> - <maintainer type="person"> - <email>mmokr...@gmail.com</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biol...@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <maintainer type="project"> - <email>proxy-ma...@gentoo.org</email> - <name>Proxy Maintainers</name> - </maintainer> - <longdescription> - BEDTools: a flexible suite of utilities for comparing genomic features. - </longdescription> - <upstream> - <remote-id type="google-code">bedtools</remote-id> - <remote-id type="github">arq5x/bedtools2</remote-id> - </upstream> -</pkgmetadata>
