commit: c53b06a989ec9c366652c58a9b63bb7a125b1395 Author: Sébastien Fabbro <bicatali <AT> gentoo <DOT> org> AuthorDate: Mon May 12 19:25:39 2014 +0000 Commit: Sebastien Fabbro <bicatali <AT> gentoo <DOT> org> CommitDate: Mon May 12 19:25:39 2014 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=c53b06a9
mumps now in main tree --- sci-libs/mumps/ChangeLog | 43 -------- sci-libs/mumps/metadata.xml | 18 ---- sci-libs/mumps/mumps-4.10.0-r2.ebuild | 184 ---------------------------------- 3 files changed, 245 deletions(-) diff --git a/sci-libs/mumps/ChangeLog b/sci-libs/mumps/ChangeLog deleted file mode 100644 index 46b5d6d..0000000 --- a/sci-libs/mumps/ChangeLog +++ /dev/null @@ -1,43 +0,0 @@ -# ChangeLog for sci-libs/mumps -# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 -# $Header: $ - - 17 Jun 2013; Justin Bronder <jsbron...@gentoo.org> mumps-4.10.0-r2.ebuild: - Don't let openmpi override malloc, works around sandbox issue in #462602 - -*mumps-4.10.0-r2 (11 Dec 2012) - - 11 Dec 2012; Sébastien Fabbro <bicat...@gentoo.org> +mumps-4.10.0-r2.ebuild, - -mumps-4.10.0-r1.ebuild, metadata.xml: - sci-libs/mumps: Install libpord, force -j1 on makefile because of random - parallel build failures, separate dummy sequential mpi library from the common - mumps library - - 15 Jul 2012; Sébastien Fabbro <bicat...@gentoo.org> mumps-4.10.0-r1.ebuild: - sci-libs/mumps: Merge dummy sequential mpi into sequential mumps - - 13 Jul 2012; Sébastien Fabbro <bicat...@gentoo.org> mumps-4.10.0.ebuild: - sci-libs/mumps: fix underlinking for sequential library - - 12 Jul 2012; Sébastien Fabbro <bicat...@gentoo.org> mumps-4.10.0.ebuild: - sci-libs/mumps: Shared library fixes and prefix love - - 12 Jul 2012; Sébastien Fabbro <bicat...@gentoo.org> mumps-4.10.0.ebuild: - sci-libs/mumps: prefix love - - 13 Mar 2012; Sébastien Fabbro <bicat...@gentoo.org> mumps-4.10.0.ebuild, - metadata.xml: - Fixed for sequential (non mpi) libraries - - 12 Mar 2012; Sébastien Fabbro <bicat...@gentoo.org> mumps-4.10.0.ebuild: - Only allow earlier parmetis versions - - 12 Mar 2012; Sébastien Fabbro <bicat...@gentoo.org> +mumps-4.10.0.ebuild, - +metadata.xml: - metis-mpi is now parmetis - -*mumps-4.10.0 (01 Jun 2011) - - 01 Jun 2011; Sébastien Fabbro <bicat...@gentoo.org> +mumps-4.10.0.ebuild, - +metadata.xml: - Initial import diff --git a/sci-libs/mumps/metadata.xml b/sci-libs/mumps/metadata.xml deleted file mode 100644 index 3aa8aad..0000000 --- a/sci-libs/mumps/metadata.xml +++ /dev/null @@ -1,18 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> -<pkgmetadata> -<herd>sci</herd> -<longdescription lang='en'> - MUltifrontal Massively Parallel sparse direct Solver implements a - direct solver for large sparse linear systems, with a particular - focus on symmetric positive definite matrices. It can operate on - distributed matrices e.g. over a cluster. It has Fortran and C - interfaces, and can interface with ordering tools such - as Scotch or Metis. -</longdescription> -<use> - <flag name="metis">Enable matrix ordering with METIS - (<pkg>sci-libs/metis</pkg>, <pkg>sci-libs/parmetis</pkg>)</flag> - <flag name="scotch">Enable matrix ordering with <pkg>sci-libs/scotch</pkg></flag> -</use> -</pkgmetadata> diff --git a/sci-libs/mumps/mumps-4.10.0-r2.ebuild b/sci-libs/mumps/mumps-4.10.0-r2.ebuild deleted file mode 100644 index dc27d83..0000000 --- a/sci-libs/mumps/mumps-4.10.0-r2.ebuild +++ /dev/null @@ -1,184 +0,0 @@ -# Copyright 1999-2014 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: $ - -EAPI=4 -inherit eutils toolchain-funcs flag-o-matic versionator fortran-2 multilib - -MYP=MUMPS_${PV} - -DESCRIPTION="MUltifrontal Massively Parallel sparse direct matrix Solver" -HOMEPAGE="http://mumps.enseeiht.fr/"; -SRC_URI="${HOMEPAGE}${MYP}.tar.gz" - -LICENSE="public-domain" -SLOT="0" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="doc examples metis mpi +scotch static-libs" - -RDEPEND=" - virtual/blas - metis? ( || ( sci-libs/metis <sci-libs/parmetis-4 ) - mpi? ( <sci-libs/parmetis-4 ) ) - scotch? ( sci-libs/scotch[mpi=] ) - mpi? ( virtual/scalapack )" - -DEPEND="${RDEPEND} - virtual/pkgconfig" - -S="${WORKDIR}/${MYP}" - -static_to_shared() { - local libstatic=${1}; shift - local libname=$(basename ${libstatic%.a}) - local soname=${libname}$(get_libname $(get_version_component_range 1-2)) - local libdir=$(dirname ${libstatic}) - - einfo "Making ${soname} from ${libstatic}" - if [[ ${CHOST} == *-darwin* ]] ; then - ${LINK:-$(tc-getCC)} ${LDFLAGS} \ - -dynamiclib -install_name "${EPREFIX}"/usr/lib/"${soname}" \ - -Wl,-all_load -Wl,${libstatic} \ - "$@" -o ${libdir}/${soname} || die "${soname} failed" - else - ${LINK:-$(tc-getCC)} ${LDFLAGS} \ - -shared -Wl,-soname=${soname} \ - -Wl,--whole-archive ${libstatic} -Wl,--no-whole-archive \ - "$@" -o ${libdir}/${soname} || die "${soname} failed" - [[ $(get_version_component_count) -gt 1 ]] && \ - ln -s ${soname} ${libdir}/${libname}$(get_libname $(get_major_version)) - ln -s ${soname} ${libdir}/${libname}$(get_libname) - fi -} - -src_prepare() { - sed -e "s:^\(CC\s*=\).*:\1$(tc-getCC):" \ - -e "s:^\(FC\s*=\).*:\1$(tc-getFC):" \ - -e "s:^\(FL\s*=\).*:\1$(tc-getFC):" \ - -e "s:^\(AR\s*=\).*:\1$(tc-getAR) cr :" \ - -e "s:^\(RANLIB\s*=\).*:\1$(tc-getRANLIB):" \ - -e "s:^\(LIBBLAS\s*=\).*:\1$($(tc-getPKG_CONFIG) --libs blas):" \ - -e "s:^\(INCPAR\s*=\).*:\1:" \ - -e 's:^\(LIBPAR\s*=\).*:\1$(SCALAP):' \ - -e "s:^\(OPTF\s*=\).*:\1${FFLAGS} -DALLOW_NON_INIT \$(PIC):" \ - -e "s:^\(OPTC\s*=\).*:\1${CFLAGS} \$(PIC):" \ - -e "s:^\(OPTL\s*=\).*:\1${LDFLAGS}:" \ - Make.inc/Makefile.inc.generic > Makefile.inc || die - # fixed a missing copy of libseq to libdir -} - -src_configure() { - LIBADD="$($(tc-getPKG_CONFIG) --libs blas) -Llib -lpord" - local ord="-Dpord" - if use metis && use mpi; then - sed -i \ - -e "s:#\s*\(LMETIS\s*=\).*:\1$($(tc-getPKG_CONFIG) --libs parmetis):" \ - -e "s:#\s*\(IMETIS\s*=\).*:\1$($(tc-getPKG_CONFIG) --cflags parmetis):" \ - Makefile.inc || die - LIBADD="${LIBADD} $($(tc-getPKG_CONFIG) --libs parmetis)" - ord="${ord} -Dparmetis" - elif use metis; then - sed -i \ - -e "s:#\s*\(LMETIS\s*=\).*:\1$($(tc-getPKG_CONFIG) --libs metis):" \ - -e "s:#\s*\(IMETIS\s*=\).*:\1$($(tc-getPKG_CONFIG) --cflags metis):" \ - Makefile.inc || die - LIBADD="${LIBADD} $($(tc-getPKG_CONFIG) --libs metis)" - ord="${ord} -Dmetis" - fi - if use scotch && use mpi; then - sed -i \ - -e "s:#\s*\(LSCOTCH\s*=\).*:\1-lptesmumps -lptscotch -lptscotcherr:" \ - -e "s:#\s*\(ISCOTCH\s*=\).*:\1-I${EROOT}usr/include/scotch:" \ - Makefile.inc || die - LIBADD="${LIBADD} -lptesmumps -lptscotch -lptscotcherr" - ord="${ord} -Dptscotch" - elif use scotch; then - sed -i \ - -e "s:#\s*\(LSCOTCH\s*=\).*:\1-lesmumps -lscotch -lscotcherr:" \ - -e "s:#\s*\(ISCOTCH\s*=\).*:\1-I${EROOT}usr/include/scotch:" \ - Makefile.inc || die - LIBADD="${LIBADD} -lesmumps -lscotch -lscotcherr" - ord="${ord} -Dscotch" - fi - if use mpi; then - sed -i \ - -e "s:^\(CC\s*=\).*:\1mpicc:" \ - -e "s:^\(FC\s*=\).*:\1mpif90:" \ - -e "s:^\(FL\s*=\).*:\1mpif90:" \ - -e "s:^\(SCALAP\s*=\).*:\1$($(tc-getPKG_CONFIG) --libs scalapack):" \ - Makefile.inc || die - export LINK=mpif90 - LIBADD="${LIBADD} $($(tc-getPKG_CONFIG) --libs scalapack)" - else - sed -i \ - -e 's:-Llibseq:-L$(topdir)/libseq:' \ - -e 's:PAR):SEQ):g' \ - -e "s:^\(SCALAP\s*=\).*:\1:" \ - -e 's:^LIBSEQNEEDED =:LIBSEQNEEDED = libseqneeded:g' \ - Makefile.inc || die - export LINK="$(tc-getFC)" - fi - sed -i -e "s:^\s*\(ORDERINGSF\s*=\).*:\1 ${ord}:" Makefile.inc || die -} - -src_compile() { - # Workaround #462602 - export FAKEROOTKEY=1 - - # -j1 because of static archive race - emake -j1 alllib PIC="-fPIC" - if ! use mpi; then - #$(tc-getAR) crs lib/libmumps_common.a libseq/*.o || die - LIBADD+=" -Llibseq -lmpiseq" - static_to_shared libseq/libmpiseq.a - fi - static_to_shared lib/libpord.a ${LIBADD} - static_to_shared lib/libmumps_common.a ${LIBADD} - - local i - for i in c d s z; do - static_to_shared lib/lib${i}mumps.a -Llib -lmumps_common ${LIBADD} - done - if use static-libs; then - emake clean - emake -j1 alllib - fi -} - -src_test() { - emake all - local dotest - if use mpi; then - dotest="mpirun -np 2" - else - export LD_LIBRARY_PATH="${S}/libseq:${LD_LIBRARY_PATH}" - fi - cd examples - ${dotest} ./ssimpletest < input_simpletest_real || die - ${dotest} ./dsimpletest < input_simpletest_real || die - ${dotest} ./csimpletest < input_simpletest_cmplx || die - ${dotest} ./zsimpletest < input_simpletest_cmplx || die - einfo "The solutions should be close to (1,2,3,4,5)" - ${dotest} ./c_example || die - einfo "The solution should be close to (1,2)" - make clean -} - -src_install() { - dolib.so lib/lib*$(get_libname)* - use static-libs && dolib.a lib/lib*.a - insinto /usr - doins -r include - if ! use mpi; then - dolib.so libseq/lib*$(get_libname)* - insinto /usr/include/mpiseq - doins libseq/*.h - use static-libs && dolib.a libseq/libmpiseq.a - fi - dodoc README ChangeLog VERSION - use doc && dodoc doc/*.pdf - if use examples; then - insinto /usr/share/doc/${PF} - doins -r examples - fi -}
