commit: 4c9b70f59eea90bb9506dad00c536c7a89b6cf50 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Wed Dec 2 22:21:09 2015 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Wed Dec 2 22:21:09 2015 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=4c9b70f5
sci-biology/full_lengther_next: new package Package-Manager: portage-2.2.26 sci-biology/full_lengther_next/ChangeLog | 9 +++++++ .../full_lengther_next-0.0.8.ebuild | 30 ++++++++++++++++++++++ sci-biology/full_lengther_next/metadata.xml | 12 +++++++++ 3 files changed, 51 insertions(+) diff --git a/sci-biology/full_lengther_next/ChangeLog b/sci-biology/full_lengther_next/ChangeLog new file mode 100644 index 0000000..641611d --- /dev/null +++ b/sci-biology/full_lengther_next/ChangeLog @@ -0,0 +1,9 @@ +# ChangeLog for sci-biology/full_lengther_next +# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 +# $Id$ + +*full_lengther_next-0.0.8 (02 Dec 2015) + + 02 Dec 2015; Martin Mokrejs <mmokr...@fold.natur.cuni.cz> + +full_lengther_next-0.0.8.ebuild, +metadata.xml: + sci-biology/full_lengther_next: new package diff --git a/sci-biology/full_lengther_next/full_lengther_next-0.0.8.ebuild b/sci-biology/full_lengther_next/full_lengther_next-0.0.8.ebuild new file mode 100644 index 0000000..77908a9 --- /dev/null +++ b/sci-biology/full_lengther_next/full_lengther_next-0.0.8.ebuild @@ -0,0 +1,30 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 +USE_RUBY="ruby19 ruby20 ruby21" + +RUBY_FAKEGEM_TASK_DOC="" +RUBY_FAKEGEM_EXTRADOC="README.rdoc History.txt" + +inherit ruby-fakegem + +DESCRIPTION="Classify assembled transcripts and fix frameshifts in ORFs" +HOMEPAGE="http://www.scbi.uma.es/site/scbi/downloads/313-full-lengthernext"; +# https://rubygems.org/gems/full_lengther_next/versions/0.0.8 +# http://www.rubydoc.info/gems/full_lengther_next/0.0.8/frames +# https://www.omniref.com/ruby/gems/full_lengther_next/0.0.8/symbols/FullLengtherNext + +LICENSE="MIT" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" + +DEPEND=">=dev-ruby/hoe-2.8.0" +RDEPEND="${DEPEND} + >=sci-biology/scbi_blast-0.0.37 + >=sci-biology/scbi_fasta-0.1.7 + >=sci-biology/scbi_mapreduce-0.0.29 + >=sci-biology/scbi_plot-0.0.6 + >=dev-ruby/xml-simple-1.0.12" diff --git a/sci-biology/full_lengther_next/metadata.xml b/sci-biology/full_lengther_next/metadata.xml new file mode 100644 index 0000000..5fa67e9 --- /dev/null +++ b/sci-biology/full_lengther_next/metadata.xml @@ -0,0 +1,12 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <herd>sci-biology</herd> + <maintainer> + <email>mmokr...@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <upstream> + <remote-id type="github">trinityrnaseq/trinityrnaseq</remote-id> + </upstream> +</pkgmetadata>
