commit: 33aeba2be18a96e6dd495c65b82ed3258dd90ec4 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Sun May 10 17:20:55 2015 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Sun May 10 17:20:55 2015 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=33aeba2b
sci-biology/conform-gt: a skeleton for a new java package with just *.java files provided Package-Manager: portage-2.2.18 sci-biology/conform-gt/ChangeLog | 10 ++++++++++ sci-biology/conform-gt/conform-gt-1174.ebuild | 22 ++++++++++++++++++++++ sci-biology/conform-gt/metadata.xml | 9 +++++++++ 3 files changed, 41 insertions(+) diff --git a/sci-biology/conform-gt/ChangeLog b/sci-biology/conform-gt/ChangeLog new file mode 100644 index 0000000..dcc6850 --- /dev/null +++ b/sci-biology/conform-gt/ChangeLog @@ -0,0 +1,10 @@ +# ChangeLog for sci-biology/conform-gt +# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + +*conform-gt-1174 (10 May 2015) + + 10 May 2015; Martin Mokrejs <mmokr...@fold.natur.cuni.cz> + +conform-gt-1174.ebuild, +metadata.xml: + sci-biology/conform-gt: a skeleton for a new java package with just *.java + files provided diff --git a/sci-biology/conform-gt/conform-gt-1174.ebuild b/sci-biology/conform-gt/conform-gt-1174.ebuild new file mode 100644 index 0000000..3429a25 --- /dev/null +++ b/sci-biology/conform-gt/conform-gt-1174.ebuild @@ -0,0 +1,22 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +DESCRIPTION="Modify your Variant Call Format file to be consistent with reference VCF" +HOMEPAGE="http://faculty.washington.edu/browning/conform-gt.html"; +SRC_URI="http://faculty.washington.edu/browning/conform-gt/conform-gt.r1174.zip"; + +LICENSE="Apache-2.0" +SLOT="0" +KEYWORDS="" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND}" +# Some source files in the net.sf.samtools package are licensed under the MIT License. + +# http://bochet.gcc.biostat.washington.edu/beagle/1000_Genomes_phase1_vcf/ + +S="${WORKDIR}"/src diff --git a/sci-biology/conform-gt/metadata.xml b/sci-biology/conform-gt/metadata.xml new file mode 100644 index 0000000..2bc8930 --- /dev/null +++ b/sci-biology/conform-gt/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <herd>sci-biology</herd> + <maintainer> + <email>mmokr...@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> +</pkgmetadata>
