commit: 8b9ba1e22ea4df15ddbb35556ad9a92f9b397ea6 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Wed Apr 29 19:36:12 2015 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Wed Apr 29 19:36:12 2015 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=8b9ba1e2
sci-biology/BlastToSam: new package, works Package-Manager: portage-2.2.18 sci-biology/BlastToSam/BlastToSam-9999.ebuild | 31 +++++++++++++++++++++++++++ sci-biology/BlastToSam/ChangeLog | 9 ++++++++ sci-biology/BlastToSam/metadata.xml | 9 ++++++++ 3 files changed, 49 insertions(+) diff --git a/sci-biology/BlastToSam/BlastToSam-9999.ebuild b/sci-biology/BlastToSam/BlastToSam-9999.ebuild new file mode 100644 index 0000000..7b476cd --- /dev/null +++ b/sci-biology/BlastToSam/BlastToSam-9999.ebuild @@ -0,0 +1,31 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +inherit git-r3 java-pkg-2 java-ant-2 + +DESCRIPTION="Convert NCBI BLAST output to SAM format" +HOMEPAGE="https://github.com/AstrorEnales/BlastToSam"; +EGIT_REPO_URI="https://github.com/AstrorEnales/BlastToSam.git"; + +LICENSE="MIT" +SLOT="0" +KEYWORDS="" +IUSE="" + +RDEPEND=">=virtual/jre-1.5:*" +DEPEND="${RDEPEND} + >=virtual/jdk-1.5:* + dev-java/ant-core" + +src_compile() { + ant compile || die +} + +src_install() { + java-pkg_dojar build/jar/BlastToSam.jar + java-pkg_dolauncher + dodoc README.md +} diff --git a/sci-biology/BlastToSam/ChangeLog b/sci-biology/BlastToSam/ChangeLog new file mode 100644 index 0000000..945f023 --- /dev/null +++ b/sci-biology/BlastToSam/ChangeLog @@ -0,0 +1,9 @@ +# ChangeLog for sci-biology/BlastToSam +# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + +*BlastToSam-9999 (29 Apr 2015) + + 29 Apr 2015; Martin Mokrejs <mmokr...@fold.natur.cuni.cz> + +BlastToSam-9999.ebuild, +metadata.xml: + sci-biology/BlastToSam: new package, works diff --git a/sci-biology/BlastToSam/metadata.xml b/sci-biology/BlastToSam/metadata.xml new file mode 100644 index 0000000..2bc8930 --- /dev/null +++ b/sci-biology/BlastToSam/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <herd>sci-biology</herd> + <maintainer> + <email>mmokr...@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> +</pkgmetadata>
