commit: 562381acaa9d5a43370e19e2e855a941840dc95a Author: Alexander Puck Neuwirth <alexander <AT> neuwirth-informatik <DOT> de> AuthorDate: Tue Jul 8 20:53:29 2025 +0000 Commit: Alexander Puck Neuwirth <apn-pucky <AT> gentoo <DOT> org> CommitDate: Mon Jul 21 15:31:39 2025 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=562381ac
sci-libs/hdf5: relay fortran USE flag to mpi Closes: https://bugs.gentoo.org/959734 Part-of: https://github.com/gentoo/gentoo/pull/42813 Closes: https://github.com/gentoo/gentoo/pull/42813 Signed-off-by: Alexander Puck Neuwirth <apn-pucky <AT> gentoo.org> sci-libs/hdf5/hdf5-1.14.6-r2.ebuild | 124 ++++++++++++++++++++++++++++++++++++ 1 file changed, 124 insertions(+) diff --git a/sci-libs/hdf5/hdf5-1.14.6-r2.ebuild b/sci-libs/hdf5/hdf5-1.14.6-r2.ebuild new file mode 100644 index 000000000000..5d9e6d11d5fc --- /dev/null +++ b/sci-libs/hdf5/hdf5-1.14.6-r2.ebuild @@ -0,0 +1,124 @@ +# Copyright 1999-2025 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +FORTRAN_NEEDED=fortran + +inherit cmake fortran-2 flag-o-matic toolchain-funcs + +MY_PV=${PV/_p/-} +MY_P=${PN}-${MY_PV} +MAJOR_P=${PN}-$(ver_cut 1-2) + +DESCRIPTION="General purpose library and file format for storing scientific data" +HOMEPAGE="https://github.com/HDFGroup/hdf5/"; +SRC_URI="https://github.com/HDFGroup/hdf5/releases/download/${PN}_${MY_PV/-/.}/${MY_P}.tar.gz"; +S="${WORKDIR}/${MY_P}" + +LICENSE="NCSA-HDF" +SLOT="0/310-cmake" +KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~hppa ~loong ~ppc ~ppc64 ~riscv ~s390 ~sparc ~x86 ~amd64-linux ~x86-linux ~arm64-macos ~x64-macos" +IUSE="cxx debug fortran +hl mpi szip test threads unsupported zlib" +RESTRICT="!test? ( test )" +REQUIRED_USE=" + !unsupported? ( + ?? ( cxx mpi ) + threads? ( !cxx !mpi !fortran !hl ) + ) +" + +DEPEND=" + mpi? ( virtual/mpi[romio,fortran?] ) + szip? ( virtual/szip ) + zlib? ( sys-libs/zlib:= ) +" +RDEPEND=" + ${DEPEND} +" +BDEPEND=" + dev-lang/perl +" + +PATCHES=( + # https://github.com/HDFGroup/hdf5/pull/5361 + "${FILESDIR}"/hdf5-1.14.6-cmake-h5cc.patch + # https://github.com/HDFGroup/hdf5/pull/5465 + "${FILESDIR}"/hdf5-1.14.6-h5cc-sh.patch + # https://github.com/HDFGroup/hdf5/pull/5467 + "${FILESDIR}"/hdf5-1.14.6-override-compiler.patch +) + +pkg_setup() { + use fortran && fortran-2_pkg_setup + + if use mpi; then + if has_version 'sci-libs/hdf5[-mpi]'; then + ewarn "Installing hdf5 with mpi enabled with a previous hdf5 with mpi disabled may fail." + ewarn "Try to uninstall the current hdf5 prior to enabling mpi support." + fi + + export CC=mpicc + use fortran && export FC=mpif90 + elif has_version 'sci-libs/hdf5[mpi]'; then + ewarn "Installing hdf5 with mpi disabled while having hdf5 installed with mpi enabled may fail." + ewarn "Try to uninstall the current hdf5 prior to disabling mpi support." + fi +} + +src_configure() { + # bug #686620 + use sparc && tc-is-gcc && append-flags -fno-tree-ccp + + local mycmakeargs=( + -DHDF5_INSTALL_CMAKE_DIR=$(get_libdir)/cmake/hdf5 + -DHDF5_INSTALL_LIB_DIR=$(get_libdir) + # just COPYING + -DHDF5_INSTALL_DATA_DIR=tmp + # redundant to include? + -DHDF5_INSTALL_MODULE_DIR=tmp + -DHDF5_INSTALL_DOC_DIR=share/doc/${PF} + -DH5_DEFAULT_PLUGINDIR="${EPREFIX}/usr/$(get_libdir)/${PN}/plugin" + + -DALLOW_UNSUPPORTED=$(usex unsupported) + -DONLY_SHARED_LIBS=ON + -DHDF5_BUILD_GENERATORS=OFF + -DHDF5_ENABLE_TRACE=$(usex debug) + -DHDF5_ENABLE_HDFS=OFF + -DHDF5_ENABLE_PARALLEL=$(usex mpi) + -DHDF5_ENABLE_SUBFILING_VFD=OFF + -DHDF5_ENABLE_SZIP_SUPPORT=$(usex szip) + -DHDF5_ENABLE_Z_LIB_SUPPORT=$(usex zlib) + -DHDF5_ENABLE_THREADSAFE=$(usex threads) + -DHDF5_ENABLE_MAP_API=OFF + -DHDF5_BUILD_DOC=OFF + -DBUILD_TESTING=$(usex test) + -DHDF5_BUILD_PARALLEL_TOOLS=OFF + -DHDF5_BUILD_TOOLS=ON + -DHDF5_ENABLE_PLUGIN_SUPPORT=OFF + -DHDF5_BUILD_HL_LIB=$(usex hl) + -DHDF5_BUILD_FORTRAN=$(usex fortran) + -DHDF5_BUILD_CPP_LIB=$(usex cxx) + -DHDF5_BUILD_JAVA=OFF + -DHDF5_BUILD_EXAMPLES=OFF + ) + + # do not force the compiler used for build + if use mpi; then + mycmakeargs+=( -DPKG_CONFIG_C_COMPILER=mpicc ) + use cxx && mycmakeargs+=( -DPKG_CONFIG_CXX_COMPILER=mpic++ ) + use fortran && mycmakeargs+=( -DPKG_CONFIG_Fortran_COMPILER=mpif90 ) + else + mycmakeargs+=( -DPKG_CONFIG_C_COMPILER='${CC:-cc}' ) + use cxx && mycmakeargs+=( -DPKG_CONFIG_CXX_COMPILER='${CXX:-c++}' ) + use fortran && + mycmakeargs+=( -DPKG_CONFIG_Fortran_COMPILER='${FC:-gfortran}' ) + fi + + cmake_src_configure +} + +src_install() { + cmake_src_install + rm -r "${ED}/usr/tmp" || die +}
