commit: f3e23765709921c51ea434288d9596b004586324 Author: Sam James <sam <AT> gentoo <DOT> org> AuthorDate: Thu Jun 26 23:15:05 2025 +0000 Commit: Sam James <sam <AT> gentoo <DOT> org> CommitDate: Thu Jun 26 23:18:51 2025 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=f3e23765
sci-libs/netcdf: add 4.9.3 I've left the sed in src_install for now as it was a pig to debug before. Closes: https://bugs.gentoo.org/959094 Signed-off-by: Sam James <sam <AT> gentoo.org> sci-libs/netcdf/Manifest | 1 + sci-libs/netcdf/netcdf-4.9.3.ebuild | 104 ++++++++++++++++++++++++++++++++++++ 2 files changed, 105 insertions(+) diff --git a/sci-libs/netcdf/Manifest b/sci-libs/netcdf/Manifest index bae5000b682d..4030e082d4ee 100644 --- a/sci-libs/netcdf/Manifest +++ b/sci-libs/netcdf/Manifest @@ -1 +1,2 @@ DIST netcdf-c-4.9.2.tar.gz 7142536 BLAKE2B b24135070d2f1f0b53fe738f8839039547eceba16d36905bb8cd7be983ce0c1127b7b01ae37dbde50087aa82fd56f00fab9bfa75c7d94fd4478031bb8a6da247 SHA512 7a96bcf673d5a9e1537d660aaf085a1dfaefc7dfb0fc96358462d92e7bbfe541184583681797e6a54d11b8588504b7d8a9b0b9bd850eecd02ed73aa2eb5ffa0d +DIST netcdf-c-4.9.3.tar.gz 13236715 BLAKE2B 1c3d029ca82ec320f41b96a44c85a369599fa62081869af5380286c02d0924c631d9a7c8dad70e556466664f2ee086cfdaec85c57ec594859083ad7acf5883c0 SHA512 5b836591561bada6f04872ac09750a0b2762aa1812d0480c6640a882053a15ac69d34b7f6e7e4b0ee5c0010d87f7eb2dc55bca5c992d7608a3eb14a4b5578d7b diff --git a/sci-libs/netcdf/netcdf-4.9.3.ebuild b/sci-libs/netcdf/netcdf-4.9.3.ebuild new file mode 100644 index 000000000000..2b1f38091a4a --- /dev/null +++ b/sci-libs/netcdf/netcdf-4.9.3.ebuild @@ -0,0 +1,104 @@ +# Copyright 1999-2025 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +inherit cmake + +DESCRIPTION="Scientific library and interface for array oriented data access" +HOMEPAGE="https://www.unidata.ucar.edu/software/netcdf/"; +SRC_URI="https://downloads.unidata.ucar.edu/netcdf-c/${PV}/${PN}-c-${PV}.tar.gz"; +S="${WORKDIR}"/${PN}-c-${PV} + +LICENSE="UCAR-Unidata" +# SONAME of libnetcdf.so +SLOT="0/19" +KEYWORDS="~amd64 ~arm ~arm64 ~ppc ~ppc64 ~riscv ~x86 ~amd64-linux ~x86-linux" +IUSE="blosc bzip2 +dap doc examples hdf +hdf5 mpi szip test zstd" +RESTRICT="!test? ( test )" + +# NOTE OPTION(ENABLE_HDF4 "Build netCDF-4 with HDF4 read capability(HDF4, HDF5 and Zlib required)." OFF) +RDEPEND=" + dev-libs/libxml2:= + sys-libs/zlib:= + blosc? ( dev-libs/c-blosc:= ) + bzip2? ( app-arch/bzip2:= ) + dap? ( net-misc/curl:= ) + hdf? ( + media-libs/libjpeg-turbo:= + sci-libs/hdf:= + sci-libs/hdf5:= + ) + hdf5? ( sci-libs/hdf5:=[hl(+),mpi=,szip=,zlib] ) + zstd? ( app-arch/zstd:= ) +" + +# deflate blosc zstd bz2 +DEPEND="${RDEPEND}" +BDEPEND=" + virtual/pkgconfig + doc? ( app-text/doxygen[dot] ) +" + +REQUIRED_USE=" + szip? ( hdf5 ) + mpi? ( hdf5 ) +" + +PATCHES=( + "${FILESDIR}"/${PN}-4.7.4-big-endian-test.patch +) + +src_configure() { + use mpi && export CC=mpicc + + local mycmakeargs=( + -DCMAKE_POLICY_DEFAULT_CMP0153="OLD" # exec_program + + -DNETCDF_ENABLE_DAP_REMOTE_TESTS=OFF + #-DENABLE_HDF4_FILE_TESTS=OFF + -DENABLE_LIBXML2=ON + + -DBUILD_SHARED_LIBS="yes" + -DBUILD_TESTING="$(usex test)" + -DBUILD_UTILITIES="yes" + + -DENABLE_DAP="$(usex dap)" + -DENABLE_DAP2="$(usex dap)" + -DENABLE_DAP4="$(usex dap)" + + -DENABLE_DOXYGEN="$(usex doc)" + -DENABLE_EXAMPLES="$(usex examples)" + -DENABLE_HDF4="$(usex hdf)" + -DENABLE_NETCDF_4="$(usex hdf5)" + -DENABLE_TESTS="$(usex test)" + + -DENABLE_NCZARR="yes" + # NOTE set these via MYCMAKEARGS if need be + # -DENABLE_NCZARR_FILTERS="yes" + # -DENABLE_NCZARR_FILTER_TESTING="yes" + # -DENABLE_NCZARR_ZIP="yes" + + -DCMAKE_DISABLE_FIND_PACKAGE_Blosc="$(usex !blosc)" + -DCMAKE_DISABLE_FIND_PACKAGE_Bz2="$(usex !bzip2)" + -DCMAKE_DISABLE_FIND_PACKAGE_Szip="$(usex !szip)" + -DCMAKE_DISABLE_FIND_PACKAGE_Zstd="$(usex !zstd)" + ) + + cmake_src_configure +} + +src_test() { + if [[ -f "${BUILD_DIR}/nc_test4/run_par_test.sh" ]]; then + sed -e 's/mpiexec/mpiexec --use-hwthread-cpus/g' -i "${BUILD_DIR}/nc_test4/run_par_test.sh" || die + fi + + cmake_src_test +} + +src_install() { + cmake_src_install + + # bug #827188 + sed -i -re "s:${EPREFIX}/usr/$(get_libdir)/lib(dl|m).(so|a);:\1;:g" "${ED}/usr/$(get_libdir)/cmake/netCDF/netCDFTargets.cmake" || die +}
