commit: b2f972c7dadc664fb99a45ba6740fd3efb418be9 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Tue Mar 17 13:21:13 2015 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Tue Mar 17 13:21:13 2015 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=b2f972c7
new package Package-Manager: portage-2.2.15 sci-biology/coral/ChangeLog | 9 +++++++++ sci-biology/coral/coral-1.4.ebuild | 28 ++++++++++++++++++++++++++++ sci-biology/coral/metadata.xml | 9 +++++++++ 3 files changed, 46 insertions(+) diff --git a/sci-biology/coral/ChangeLog b/sci-biology/coral/ChangeLog new file mode 100644 index 0000000..06fd2f3 --- /dev/null +++ b/sci-biology/coral/ChangeLog @@ -0,0 +1,9 @@ +# ChangeLog for sci-biology/coral +# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + +*coral-1.4 (17 Mar 2015) + + 17 Mar 2015; Martin Mokrejs <mmokr...@fold.natur.cuni.cz> +coral-1.4.ebuild, + +metadata.xml: + new package diff --git a/sci-biology/coral/coral-1.4.ebuild b/sci-biology/coral/coral-1.4.ebuild new file mode 100644 index 0000000..f716146 --- /dev/null +++ b/sci-biology/coral/coral-1.4.ebuild @@ -0,0 +1,28 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +inherit eutils + +DESCRIPTION="Error corrector for Illumina and Roche/454 reads using multiple alignment info" +HOMEPAGE="http://www.cs.helsinki.fi/u/lmsalmel/coral"; +SRC_URI="http://www.cs.helsinki.fi/u/lmsalmel/coral/coral-1.4.tar.gz"; + +LICENSE="GPL-3" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND}" + +src_prepare(){ + sed -e "s#-O3 -Wall -g#${CXXFLAGS}#; s#g++#$(tc-getCXX)#" -i Makefile || die +} + +src_install(){ + dobin coral + dodoc README +} diff --git a/sci-biology/coral/metadata.xml b/sci-biology/coral/metadata.xml new file mode 100644 index 0000000..2bc8930 --- /dev/null +++ b/sci-biology/coral/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <herd>sci-biology</herd> + <maintainer> + <email>mmokr...@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> +</pkgmetadata>
