commit: 7b043728312fa444242a9713c43332cd0bea44b5 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Mon Mar 9 17:11:20 2015 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Mon Mar 9 17:11:20 2015 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=7b043728
new package, working ebuild Package-Manager: portage-2.2.15 sci-biology/ORFcor/ChangeLog | 9 +++++++++ sci-biology/ORFcor/ORFcor-20130507.ebuild | 27 +++++++++++++++++++++++++++ sci-biology/ORFcor/metadata.xml | 9 +++++++++ 3 files changed, 45 insertions(+) diff --git a/sci-biology/ORFcor/ChangeLog b/sci-biology/ORFcor/ChangeLog new file mode 100644 index 0000000..7119777 --- /dev/null +++ b/sci-biology/ORFcor/ChangeLog @@ -0,0 +1,9 @@ +# ChangeLog for sci-biology/ORFcor +# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + +*ORFcor-20130507 (09 Mar 2015) + + 09 Mar 2015; Martin Mokrejs <mmokr...@fold.natur.cuni.cz> + +ORFcor-20130507.ebuild, +metadata.xml: + new package, working ebuild diff --git a/sci-biology/ORFcor/ORFcor-20130507.ebuild b/sci-biology/ORFcor/ORFcor-20130507.ebuild new file mode 100644 index 0000000..ad9c638 --- /dev/null +++ b/sci-biology/ORFcor/ORFcor-20130507.ebuild @@ -0,0 +1,27 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +DESCRIPTION="Automated editor of protein-coding sequences" +HOMEPAGE="http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0058387"; +SRC_URI="http://www.currielab.wisc.edu/files/ORFcor.tar.gz"; + +LICENSE="BSD" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" + +DEPEND="dev-lang/perl + sci-biology/hmmer + sci-biology/muscle + dev-perl/Parallel-ForkManager" +RDEPEND="${DEPEND}" + +S="${WORKDIR}"/ORFcor + +src_install(){ + dobin *.pl + dodoc README +} diff --git a/sci-biology/ORFcor/metadata.xml b/sci-biology/ORFcor/metadata.xml new file mode 100644 index 0000000..2bc8930 --- /dev/null +++ b/sci-biology/ORFcor/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <herd>sci-biology</herd> + <maintainer> + <email>mmokr...@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> +</pkgmetadata>
