jlec 15/03/02 13:14:37 Modified: njplot-2.3.ebuild ChangeLog Added: njplot-2.3-r1.ebuild Log: Fix dependencies, #425710; make buildsystem sane; fix format-security (Portage version: 2.2.17/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
Revision Changes Path 1.3 sci-biology/njplot/njplot-2.3.ebuild file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/njplot/njplot-2.3.ebuild?rev=1.3&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/njplot/njplot-2.3.ebuild?rev=1.3&content-type=text/plain diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/njplot/njplot-2.3.ebuild?r1=1.2&r2=1.3 Index: njplot-2.3.ebuild =================================================================== RCS file: /var/cvsroot/gentoo-x86/sci-biology/njplot/njplot-2.3.ebuild,v retrieving revision 1.2 retrieving revision 1.3 diff -u -r1.2 -r1.3 --- njplot-2.3.ebuild 31 Oct 2009 17:59:45 -0000 1.2 +++ njplot-2.3.ebuild 2 Mar 2015 13:14:37 -0000 1.3 @@ -1,6 +1,6 @@ -# Copyright 1999-2009 Gentoo Foundation +# Copyright 1999-2015 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/njplot/njplot-2.3.ebuild,v 1.2 2009/10/31 17:59:45 maekke Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/njplot/njplot-2.3.ebuild,v 1.3 2015/03/02 13:14:37 jlec Exp $ EAPI="2" @@ -9,15 +9,16 @@ DESCRIPTION="A phylogenetic tree drawing program which supports tree rooting" HOMEPAGE="http://pbil.univ-lyon1.fr/software/njplot.html"; SRC_URI="ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/njplot/archive/njplot-${PV}.tar.gz"; -LICENSE="public-domain" SLOT="0" +LICENSE="public-domain" KEYWORDS="amd64 x86" IUSE="" -RDEPEND="x11-libs/libXmu" -DEPEND="sci-biology/ncbi-tools[X] - ${RDEPEND}" +RDEPEND=" + sci-biology/ncbi-tools[X,static-libs] + x11-libs/libXmu" +DEPEND="${RDEPEND}" src_prepare() { sed -i -e 's|/banques0/ncbiJun04|/usr/include/ncbi|' \ 1.13 sci-biology/njplot/ChangeLog file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/njplot/ChangeLog?rev=1.13&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/njplot/ChangeLog?rev=1.13&content-type=text/plain diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/njplot/ChangeLog?r1=1.12&r2=1.13 Index: ChangeLog =================================================================== RCS file: /var/cvsroot/gentoo-x86/sci-biology/njplot/ChangeLog,v retrieving revision 1.12 retrieving revision 1.13 diff -u -r1.12 -r1.13 --- ChangeLog 11 Mar 2013 16:22:49 -0000 1.12 +++ ChangeLog 2 Mar 2015 13:14:37 -0000 1.13 @@ -1,6 +1,13 @@ # ChangeLog for sci-biology/njplot -# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/njplot/ChangeLog,v 1.12 2013/03/11 16:22:49 jlec Exp $ +# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/njplot/ChangeLog,v 1.13 2015/03/02 13:14:37 jlec Exp $ + +*njplot-2.3-r1 (02 Mar 2015) + + 02 Mar 2015; Justin Lecher <[email protected]> + +files/njplot-2.3-buildsystem.patch, +files/njplot-2.3-format-security.patch, + +njplot-2.3-r1.ebuild, njplot-2.3.ebuild: + Fix dependencies, #425710; make buildsystem sane; fix format-security 11 Mar 2013; Justin Lecher <[email protected]> metadata.xml: Drop Andrey as maintainer so that bugs get assigned to sci-biology directly @@ -56,4 +63,3 @@ 06 Oct 2004; Olivier Fisette <[email protected]> +metadata.xml, +njplot-unrooted-1.ebuild: Initial import. - 1.1 sci-biology/njplot/njplot-2.3-r1.ebuild file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/njplot/njplot-2.3-r1.ebuild?rev=1.1&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/njplot/njplot-2.3-r1.ebuild?rev=1.1&content-type=text/plain Index: njplot-2.3-r1.ebuild =================================================================== # Copyright 1999-2015 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: /var/cvsroot/gentoo-x86/sci-biology/njplot/njplot-2.3-r1.ebuild,v 1.1 2015/03/02 13:14:37 jlec Exp $ EAPI=5 inherit eutils toolchain-funcs DESCRIPTION="A phylogenetic tree drawing program which supports tree rooting" HOMEPAGE="http://pbil.univ-lyon1.fr/software/njplot.html"; SRC_URI="ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/njplot/archive/njplot-${PV}.tar.gz"; SLOT="0" LICENSE="public-domain" KEYWORDS="~amd64 ~x86" IUSE="" RDEPEND=" sci-biology/ncbi-tools[X,static-libs] x11-libs/libXmu" DEPEND="${RDEPEND}" src_prepare() { sed -i -e "s%njplot.help%${EPREFIX}/usr/share/doc/${PF}/njplot.help%" njplot-vib.c || die epatch \ "${FILESDIR}"/${P}-format-security.patch \ "${FILESDIR}"/${P}-buildsystem.patch tc-export CC } src_install() { dobin newicktops newicktotxt njplot unrooted doman *.1 dodoc README njplot.help }
