External Email - Use Caution Dear Dr. Greve,
According to your advice, I could run the LGI command successfully. I greatly appreciate for your support! Best, Daiki > 2023/11/26 17:40、Douglas N. Greve <dgr...@mgh.harvard.edu>のメール: > > Copy the attached matlab file into $FREESURFER/matlab/freesurfer_read_surf.m > > On 11/24/2023 12:53 PM, 笹林大樹 wrote: >> External Email - Use Caution >> >> Dear Freesurfer experts, >> >> I’m sorry, I would like to add some missing information about the following >> question. >> >> OS: CentOS Linux 7 >> FS ver: fs7.1.0 >> Matlab ver: R2017a or R2022a >> >> I would be grateful for your answer when you have time. >> >> Best, >> >> Daiki Sasabayashi >> >>> 転送されたメッセージ: >>> >>> 差出人: 笹林大樹 <ds...@med.u-toyama.ac.jp <mailto:ds...@med.u-toyama.ac.jp>> >>> 件名: [Freesurfer] Errors in LGI command >>> 日付: 2023年11月22日 15:19:36 GMT-5 >>> 宛先: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu >>> <mailto:freesurfer@nmr.mgh.harvard.edu>> >>> 返信先: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu >>> <mailto:freesurfer@nmr.mgh.harvard.edu>> >>> >>> External Email - Use Caution >>> >>> >>> Dear Freesurfer experts, >>> >>> I have run the following command: >>> recon-all -s sub-1001 -localGI -no-isrunning >>> >>> However, I got the error message as below. >>> >>> >> Warning: Input argument must be a character vector. >>> > In ver (line 41) In freesurfer_read_surf (line 70) In >>> > find_corresponding_center_FSformat (line 26) >>> Error using fprintf >>> Function is not defined for 'struct' inputs. >>> >>> Error in freesurfer_read_surf (line 70) >>> fprintf('FREESURFER_READ_SURF [v %s]\n',ver(11:15)); >>> >>> Error in find_corresponding_center_FSformat (line 26) >>> [mesh_pial.vertices, mesh_pial.faces] = freesurfer_read_surf(pial); >>> >>> >> >>> ERROR: find_corresponding_center_FSformat did not complete successfully! >>> Linux dn003 3.10.0-1160.88.1.el7.x86_64 #1 SMP Tue Mar 7 15:41:52 UTC 2023 >>> x86_64 x86_64 x86_64 GNU/Linux >>> >>> recon-all -s sub-1001 exited with ERRORS at Wed Nov 22 14:59:33 EST 2023 >>> >>> How can I resolve the problem? >>> Thank you for your consideration. >>> >>> Best, >>> >>> Daiki Sasabayashi >>> _______________________________________________ >>> Freesurfer mailing list >>> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> >>> https://secure-web.cisco.com/13nnR_UU4wRRg2SobbLtHMPFXH5faQpDdN0C4jDh8OJRMkKqBFWOT4vk_2VDUWWhcQo5pk-rsczW3_wSZ9A9R-Sm0vtvCVrCOI8LYoJKQ4p_urAJh9KxIm8hPcsu16trQIbs8RjgbUcViuqP_hy9CDVneojO6240yTnTjrJXRwhCsHlAwesytHKKDpEGdTW9H3QprmhDulos_zhTANXFjgGXP5_m854UPZJV8_ZewFTvIaHian_KQgiw6EosvCTke9VNXBtAS2XzZVxsDsdU4X8NOly9Sq2jCD7fhWUsvnaaeIMaePJOI_PXbLUQ1Lwx5/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer >>> >>> <https://secure-web.cisco.com/13nnR_UU4wRRg2SobbLtHMPFXH5faQpDdN0C4jDh8OJRMkKqBFWOT4vk_2VDUWWhcQo5pk-rsczW3_wSZ9A9R-Sm0vtvCVrCOI8LYoJKQ4p_urAJh9KxIm8hPcsu16trQIbs8RjgbUcViuqP_hy9CDVneojO6240yTnTjrJXRwhCsHlAwesytHKKDpEGdTW9H3QprmhDulos_zhTANXFjgGXP5_m854UPZJV8_ZewFTvIaHian_KQgiw6EosvCTke9VNXBtAS2XzZVxsDsdU4X8NOly9Sq2jCD7fhWUsvnaaeIMaePJOI_PXbLUQ1Lwx5/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer> >>> Please note that this e-mail is not secure (encrypted). 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