Ouch. Is the aseg also like that?
Cheers,
/E
--
Juan Eugenio Iglesias
Senior research fellow
CMIC (UCL), MGH (HMS) and CSAIL (MIT)
http://www.jeiglesias.com
From: <freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Daniel Callow
<ddcc2...@gmail.com>
Reply-To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Date: Thursday, 8 August 2019 at 08:20
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] SegmentHA_T1.sh hippocampal sub-field issue
External Email - Use Caution
Hello,
When using segmentHA_T1.sh on one of my subjects the left hippocampus ROI seems
to spill over a lot into white matter and other gray matter regions. See
attached picture. Is there a way to fix this or improve the hippocampal
segmentation? Or will I have to scrap this subject's data? I have also included
the scan log.
Best,
Daniel Callow
PhD Student, Neuroscience and Cognitive Science
Exercise for Brain Health Lab
University of Maryland, College Park
ddcc2...@gmail.com<mailto:ddcc2...@gmail.com>
443-254-6298
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
